Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1045 ATGGCTGGGATTTGTTGTGGTGTTGTTGGTGACGGAGAGAATCCAGCTACAATTGAGCCAACTTCTTCACGGCCTTTAGCTCGCCGGAGTTTGGACCTCCTGCCGTTGAAATACATTGCCGACATGGCGGTTCCGCCTCCCGAAGGCAGCCGTAAGCGGCAGAAGCTGGATCTCTCTGCCTCTCCGGCGAGGGAGTGCGAGAACGCAGTTGAGAGTTCCAAATCAAACCCTAGTAAACTCAAAGAAGAGCTTAACATCAAGAAGGAATCAACAAATCACGAAGCAAGTAGTAGTTCGGAAGTACCAACGTTAATTTCTAAGGAGAAAAAGGAGGTTGTTGAAGAGTGTCCCAAGTACGGAGTCACATCGGTATGTGGCAGGAGGAGGGACATGGAAGACGCAGTTTCGGTGCGTCCCTCCTTCTGCCAAGTTCAAAACGGCACAAACACAAACGATCAAAACGACGTGCCCTTTCACTTCTTTGGTGTATATGACGGTCATGGATGTTCACATGTTGCAACTATGTGCAAGGAGAGGCTTCACGGGATTGTGAAGGATGAGATTGGAAAATCTCAAGAGAACTTTGAATGGAAATCCGCCATGGAGAAAAGCTTCACTCGCATGGATGACGAGGTTCAAAGCTGGAGCCATAGCAATCAAACCTCCACCTGCAGGTGCGAGCTCCAAAAACCTCACTGCGACGCCGTCGGCTCCACTGCCGTCGTCGCCGTTGTCACGCCGGAGAAAATCATCGTCTCCAACTGCGGCGACTCTCGCGCCGTACTCTGCCGCAACGGTGTCGCCATCCCCCTCTCCAGTGATCACAAGCCGGACCGACCGGACGAGTTGCTCCGAGTCCAAAACGCCGGTGGGCGCGTGATCTATTGGGACGGTCCAAGAGTGCTTGGGGTGCTGGCCATGTCAAGAGCCATAGGTGATAACTATTTGAAGCCTTATGTGATTTCGGAACCGGAGGTGACTGTTACGGATCGGAGTGAGGAGGATGAGTGTTTGATTCTGGCGAGTGATGGGCTTTGGGATGTTGTTTCTAACGACACGGCGTGTGGGGTGGTCAGGATGTGTCTGAAGGCGCAGAAGCTGCCGTCGCCGCCGGGGTCTCCGGGGAGGGATGTGGCGGCGGATGGATCCGACAAGGCGTGCTCCGATGCTTCGATTCTTCTGACGAAGCTGGCTTTGGCGAGGCACAGCTCCGACAATGTTAGCGTGGTGGTGGTTGATTTGAGGAGGGATCAACGTCAACAACAAAGTTGA 1272 0.5338 MAGICCGVVGDGENPATIEPTSSRPLARRSLDLLPLKYIADMAVPPPEGSRKRQKLDLSASPARECENAVESSKSNPSKLKEELNIKKESTNHEASSSSEVPTLISKEKKEVVEECPKYGVTSVCGRRRDMEDAVSVRPSFCQVQNGTNTNDQNDVPFHFFGVYDGHGCSHVATMCKERLHGIVKDEIGKSQENFEWKSAMEKSFTRMDDEVQSWSHSNQTSTCRCELQKPHCDAVGSTAVVAVVTPEKIIVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELLRVQNAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTDRSEEDECLILASDGLWDVVSNDTACGVVRMCLKAQKLPSPPGSPGRDVAADGSDKACSDASILLTKLALARHSSDNVSVVVVDLRRDQRQQQS* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1045 423 Gene3D - 105 423 IPR036457 -
Ahy17g1045 423 PANTHER ALPHABET, ISOFORM E-RELATED 25 420 - -
Ahy17g1045 423 ProSiteProfiles PPM-type phosphatase domain profile. 118 414 IPR001932 -
Ahy17g1045 423 SMART PP2C_4 106 412 IPR001932 -
Ahy17g1045 423 CDD PP2Cc 118 367 IPR001932 -
Ahy17g1045 423 ProSitePatterns PPM-type phosphatase domain signature. 160 168 IPR000222 GO:0043169
Ahy17g1045 423 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 25 420 - -
Ahy17g1045 423 SUPERFAMILY PP2C-like 116 415 IPR036457 -
Ahy17g1045 423 MobiDBLite consensus disorder prediction 42 81 - -
Ahy17g1045 423 Pfam Protein phosphatase 2C 118 406 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1045 Ahy-Chr17 13520640 13523141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1045 96 421 PP2C-type Phosphatase Gene Family AT1G07430 60.745 2.89e-146 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1045 K14497 - gmx:100776356 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1045 17 13520640 13523141 Ahy17g1045 17 13520640 13523141 ECH
Ahy17g1045 17 13520640 13523141 Ahy7g0861 7 11125041 11127571 hybridization