Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1036 ATGACGTCTCTTTTGAGAGTGAAGCACTACCAACTTATTTATCCGACCATGGAAATGAGTGATGATGGAAATTACTTTTGTGATGCTAAAGAACCTCTAAGCGATAAAGGCTTGGACATGGATTCTGAAGCCGATGATTTTTTTGACGATAACTTCTATGAGAACTGGGATGGCAGGTCAATTGATGGTATTAGTGACCTTGGTAGTTTTAATTTAAATTCACTAATGGTGGATGAGATTAAGATGCTACATTTTCCATATCTTAATGCCGCCTTCTCTTTCTACAATTTGTATGCCAAAATGAACAGGTTTGCTGCAAGGAGGAGCAAGTTGAGGCACAATGTTAACAGTGATATCACGCAACAATCATTTGTTTGCTTTAGAGAGGAATTTAGGGAGACAAAATCCTATGACGAGAGCAGTCAACGTAAACATGAGCCAAAACCAGAGACTAGATATGGATGCCAGGCTGAGATATATGTTCATGTCCATATAGATACTGAGAGATGGATCATAACATATTTTCAAGAAGCTTGTAACCACGTTCTTGCTAATGAATTGACCTTCATGCTTCCGGGACATAGGAAGATGGATGCTGGCGCAATCAACCAAATGAACATGATGTTGAAAGTTAGGATAAAGACTCCTCAGATTTATGCATCCTTTGTCAACACATTAGGGGACTTCCAAAATGTTCCATTGTTAAAGAGAGAATATTCGTTTGATACTTGGCTGACAAAGAGGGTCATTTGGTACATGTTTTTTGGTCTAACAAATGTAGTCAATTGGATTATCATATCTTTGGAGATGTGTTGGCGTTATGCGACATATCAGGAAAATAAGTACATGTGCCCTCTTGTTGTGTTTTTTGGTATAAATCATCATAACCAAACCATTGTGTTTGCCGCTGCTCTTGTCTCAAATGAGAATGAGGATACTTATATTTGGTTACTGCAACAATTCTTGGAATGTATGAATGAAAAAGCTCCTCAATGTGTTATCACGGATGGTCACGGAACCATGAAAAAGGCCATTGAATCAGCGTTTTCTAGTACCTACCCCCGGTTTTGTGCATTGCACTTAATTAGAAATGCAACATCCAACCTTGGAAACCCAACATTCACGTCCGAGTTTAAAAGATGCATCCCTTTCGATTATGAGATATCAGAGTTCCAAGACCGGTGGGTGATGATGGTTTCAAAACTTGGCCTCGAGAATAATCAATGGGTGTGTGACCTTTATGCCAGGAAGAAAATGTAG 1260 0.3897 MTSLLRVKHYQLIYPTMEMSDDGNYFCDAKEPLSDKGLDMDSEADDFFDDNFYENWDGRSIDGISDLGSFNLNSLMVDEIKMLHFPYLNAAFSFYNLYAKMNRFAARRSKLRHNVNSDITQQSFVCFREEFRETKSYDESSQRKHEPKPETRYGCQAEIYVHVHIDTERWIITYFQEACNHVLANELTFMLPGHRKMDAGAINQMNMMLKVRIKTPQIYASFVNTLGDFQNVPLLKREYSFDTWLTKRVIWYMFFGLTNVVNWIIISLEMCWRYATYQENKYMCPLVVFFGINHHNQTIVFAAALVSNENEDTYIWLLQQFLECMNEKAPQCVITDGHGTMKKAIESAFSSTYPRFCALHLIRNATSNLGNPTFTSEFKRCIPFDYEISEFQDRWVMMVSKLGLENNQWVCDLYARKKM* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1036 419 PANTHER OS02G0262500 PROTEIN 85 240 - -
Ahy17g1036 419 Pfam MULE transposase domain 275 364 IPR018289 -
Ahy17g1036 419 PANTHER OS02G0262500 PROTEIN 275 418 - -
Ahy17g1036 419 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 275 418 IPR031052 GO:0006355
Ahy17g1036 419 Pfam FAR1 DNA-binding domain 93 184 IPR004330 -
Ahy17g1036 419 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 85 240 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1036 Ahy-Chr17 13393851 13395207 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g1036 FAR1 1.50E-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1036 - - aip:107606601 870.537