Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0999 ATGGTGAAAGGTCGCCAAGGAGAGCGTGTCAGACTTTATGTCAGGGGTTCAATCCTTGGATACAAGAGGTCCAAGTCAAACCAATATCCAAACACCTCTCTTATCCAGATTGAGGGAGTAAACACCAAGGAAGAGGTTGCATGGTATGCTGGGAAGCGCATGGCATACATATACAAAGCCAAGGTAAAGAAGAATGGATCCCACTATCGCTGCATTTGGGGTAAGGTTACCAGGCCTCATGGTAACAGTGGTATTGTCCGTGCTAAGTTCAAGTCAAACCTGCCACCAAAATCAATGGGAGCAAGGGTCAGAGTCTTCATGTATCCAAGCAATATATGA 339 0.4572 MVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYAGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0999 112 SUPERFAMILY Translation proteins 12 106 IPR009000 -
Ahy17g0999 112 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Ahy17g0999 112 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Ahy17g0999 112 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 112 - -
Ahy17g0999 112 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Ahy17g0999 112 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 112 IPR001780 GO:0003735|GO:0005840|GO:0006412
Ahy17g0999 112 Gene3D translation elongation factor selb, chain A, domain 4 6 112 IPR038661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0999 Ahy-Chr17 12568730 12571051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0999 1 112 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 91.071 1.82e-75 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0999 K02917 - pop:7458094 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0999 17 12568730 12571051 Ahy7g0825 7 10508218 10510503 hybridization