Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy17g0990 | ATGGAATTGGAAAGCGTGTATCCTGGGTGGAATTGGAACTGGAATTTGTTAGAGCAAGAGAGGCAGAGCAGCAGCAGAGAATGGAGTAAAGAGGACAACAAGAAGTTCGAGAGCGCGCTGGCGATATTCGATAAGGAGACACCGGATAGGTGGCTGAAGGTGGCTGCTATGATCCCCGGAAAGAGTGTGTATGATGTGATCAAGCAGTACAGAGAGCTGGAAGAAGATGTCAATGATATAGAAGCCGGCCGGGTCCCTGTCCCCGGCTATATCGCCTCTTCTTTCACCTTCGAGCTTCTTCACCACCACAACCATGATGGATCTCGAAGAAGGCCTAATACCCCTAGACCTTCTTCTGATCAAGAAAGGAAGAAAGGTGTTCCTTGGACTCAAGAGGAGCACAGACGTTTTCTGATGGGGCTTTTGAAGTATGGAAAAGGAGATTGGAGAAACATTTCACGCAATTTCGTGGTGACGAAGACTCCTACTCAAGTTGCTAGCCATGCTCAGAAGTACTACATAAGGCAAAAGGTTTCTTCAGGAGGGAAAGATAAGAGGAGACCGAGCATCCATGATATAACAACTCTTAACCTCGCAGAAGCCACTGCTACTTTAGATGATAATAATATCAACAAGCCCCTCTCATTCAATGAGTCTAAAGTACAATTGGACTGGTTCAATCACTGTAATGATGATGGATCAGTGATGGTTTTCGACCCCAATTGCGACCATTTGCAAGAGCAGGATCTCTTTGATTGTGCTTTCCATGAAGCTTATGCAAAGCTCAAGATCCCGCATTTCAACAAGGAAGCTGATTTCGGTATTCATGCATTGTAA | 837 | 0.454 | MELESVYPGWNWNWNLLEQERQSSSREWSKEDNKKFESALAIFDKETPDRWLKVAAMIPGKSVYDVIKQYRELEEDVNDIEAGRVPVPGYIASSFTFELLHHHNHDGSRRRPNTPRPSSDQERKKGVPWTQEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKVSSGGKDKRRPSIHDITTLNLAEATATLDDNNINKPLSFNESKVQLDWFNHCNDDGSVMVFDPNCDHLQEQDLFDCAFHEAYAKLKIPHFNKEADFGIHAL* | 279 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy17g0990 | 278 | Pfam | Myb-like DNA-binding domain | 128 | 172 | IPR001005 | - | |
Ahy17g0990 | 278 | SUPERFAMILY | Homeodomain-like | 122 | 177 | IPR009057 | - | |
Ahy17g0990 | 278 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 124 | 176 | IPR006447 | GO:0003677 | |
Ahy17g0990 | 278 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 14 | 257 | IPR043363 | - | |
Ahy17g0990 | 278 | SUPERFAMILY | Homeodomain-like | 26 | 80 | IPR009057 | - | |
Ahy17g0990 | 278 | Gene3D | - | 19 | 87 | - | - | |
Ahy17g0990 | 278 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 14 | 257 | - | - | |
Ahy17g0990 | 278 | Gene3D | - | 127 | 178 | - | - | |
Ahy17g0990 | 278 | MobiDBLite | consensus disorder prediction | 103 | 129 | - | - | |
Ahy17g0990 | 278 | ProSiteProfiles | SANT domain profile. | 23 | 78 | IPR017884 | - | |
Ahy17g0990 | 278 | CDD | SANT | 27 | 73 | IPR001005 | - | |
Ahy17g0990 | 278 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 121 | 177 | IPR017930 | - | |
Ahy17g0990 | 278 | CDD | SANT | 128 | 172 | IPR001005 | - | |
Ahy17g0990 | 278 | SMART | sant | 24 | 76 | IPR001005 | - | |
Ahy17g0990 | 278 | SMART | sant | 125 | 175 | IPR001005 | - | |
Ahy17g0990 | 278 | ProSiteProfiles | SANT domain profile. | 129 | 177 | IPR017884 | - | |
Ahy17g0990 | 278 | ProSiteProfiles | Myb-like domain profile. | 121 | 173 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy17g0990 | Ahy-Chr17 | 12468825 | 12470694 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Ahy17g0990 | Myb_DNA-binding | 2.30E-10 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy17g0990 | - | - | gmx:778039 | 368.237 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy12g1983 | 12 | 102431997 | 102435249 | Ahy17g0990 | 17 | 12468825 | 12470694 | ECH | |
Ahy17g1518 | 17 | 30195923 | 30198725 | Ahy17g0990 | 17 | 12468825 | 12470694 | ECH | |
Ahy11g0426 | 11 | 5816066 | 5818688 | Ahy17g0990 | 17 | 12468825 | 12470694 | ECH | |
Ahy17g0990 | 17 | 12468825 | 12470694 | Ahy17g0990 | 17 | 12468825 | 12470694 | ECH | |
Ahy17g0990 | 17 | 12468825 | 12470694 | Ahy7g0815 | 7 | 10422587 | 10424390 | hybridization |