Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0990 ATGGAATTGGAAAGCGTGTATCCTGGGTGGAATTGGAACTGGAATTTGTTAGAGCAAGAGAGGCAGAGCAGCAGCAGAGAATGGAGTAAAGAGGACAACAAGAAGTTCGAGAGCGCGCTGGCGATATTCGATAAGGAGACACCGGATAGGTGGCTGAAGGTGGCTGCTATGATCCCCGGAAAGAGTGTGTATGATGTGATCAAGCAGTACAGAGAGCTGGAAGAAGATGTCAATGATATAGAAGCCGGCCGGGTCCCTGTCCCCGGCTATATCGCCTCTTCTTTCACCTTCGAGCTTCTTCACCACCACAACCATGATGGATCTCGAAGAAGGCCTAATACCCCTAGACCTTCTTCTGATCAAGAAAGGAAGAAAGGTGTTCCTTGGACTCAAGAGGAGCACAGACGTTTTCTGATGGGGCTTTTGAAGTATGGAAAAGGAGATTGGAGAAACATTTCACGCAATTTCGTGGTGACGAAGACTCCTACTCAAGTTGCTAGCCATGCTCAGAAGTACTACATAAGGCAAAAGGTTTCTTCAGGAGGGAAAGATAAGAGGAGACCGAGCATCCATGATATAACAACTCTTAACCTCGCAGAAGCCACTGCTACTTTAGATGATAATAATATCAACAAGCCCCTCTCATTCAATGAGTCTAAAGTACAATTGGACTGGTTCAATCACTGTAATGATGATGGATCAGTGATGGTTTTCGACCCCAATTGCGACCATTTGCAAGAGCAGGATCTCTTTGATTGTGCTTTCCATGAAGCTTATGCAAAGCTCAAGATCCCGCATTTCAACAAGGAAGCTGATTTCGGTATTCATGCATTGTAA 837 0.454 MELESVYPGWNWNWNLLEQERQSSSREWSKEDNKKFESALAIFDKETPDRWLKVAAMIPGKSVYDVIKQYRELEEDVNDIEAGRVPVPGYIASSFTFELLHHHNHDGSRRRPNTPRPSSDQERKKGVPWTQEEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKVSSGGKDKRRPSIHDITTLNLAEATATLDDNNINKPLSFNESKVQLDWFNHCNDDGSVMVFDPNCDHLQEQDLFDCAFHEAYAKLKIPHFNKEADFGIHAL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0990 278 Pfam Myb-like DNA-binding domain 128 172 IPR001005 -
Ahy17g0990 278 SUPERFAMILY Homeodomain-like 122 177 IPR009057 -
Ahy17g0990 278 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 124 176 IPR006447 GO:0003677
Ahy17g0990 278 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 14 257 IPR043363 -
Ahy17g0990 278 SUPERFAMILY Homeodomain-like 26 80 IPR009057 -
Ahy17g0990 278 Gene3D - 19 87 - -
Ahy17g0990 278 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 14 257 - -
Ahy17g0990 278 Gene3D - 127 178 - -
Ahy17g0990 278 MobiDBLite consensus disorder prediction 103 129 - -
Ahy17g0990 278 ProSiteProfiles SANT domain profile. 23 78 IPR017884 -
Ahy17g0990 278 CDD SANT 27 73 IPR001005 -
Ahy17g0990 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 121 177 IPR017930 -
Ahy17g0990 278 CDD SANT 128 172 IPR001005 -
Ahy17g0990 278 SMART sant 24 76 IPR001005 -
Ahy17g0990 278 SMART sant 125 175 IPR001005 -
Ahy17g0990 278 ProSiteProfiles SANT domain profile. 129 177 IPR017884 -
Ahy17g0990 278 ProSiteProfiles Myb-like domain profile. 121 173 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0990 Ahy-Chr17 12468825 12470694 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy17g0990 Myb_DNA-binding 2.30E-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0990 - - gmx:778039 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1983 12 102431997 102435249 Ahy17g0990 17 12468825 12470694 ECH
Ahy17g1518 17 30195923 30198725 Ahy17g0990 17 12468825 12470694 ECH
Ahy11g0426 11 5816066 5818688 Ahy17g0990 17 12468825 12470694 ECH
Ahy17g0990 17 12468825 12470694 Ahy17g0990 17 12468825 12470694 ECH
Ahy17g0990 17 12468825 12470694 Ahy7g0815 7 10422587 10424390 hybridization