Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0980 ATGCCTTCTTCAGCACCCACTTTGGTTTCAAAATGCACCATCTTTCCTGACCAAAAATCCTCGCTCTCAAAACTCAAACTTAGTGTTTCAGACCTTCCTATGTTATCCTGCCACTACATCCAAAAGGGATGCCTCTTCACCCAACCAACTTCCCTCTCTTCTAACCAACTAATTCCACTCTTGAAATCCGCCCTCTCACGAACCCTCTCCCTCTTTCCCCCTCTCGCCGGTCGTTTAACCACTGACTCCCACGGTTATGTCTATATTTCCTGTAACGACGCCGGCGTCCACTTCCTCCACGCCGCCGCACCCGCTCTCAATGTTCTCGATCTTCTTTCCCCCCTTGACGTCCATAAATCTTTCAGAGAATTCTTCACCTTCGATAGAAAGGTTAGTTACAGCGGTCATTACTCCCCGATTATGGCCGTTCAGGTAACCGAGCTCGCCGACGGCTTTTTCATCGGAATTTCCGTCAACCATGCCGTCACTGACGGAACCTCTTTCTGGAACTTCTTCAACACATTCGCTCAGGAATGCAGAGGAGCCAGTAAGAGTATCCGGAATGTTCCTGACTTCCGCCGCGACAGCGTTCTCATCTCCGAGGCCGTCCTCCGATTGCCAGAGGGCGGGCCGAAGGTGACGTTCAACGCCGACGCGCCAATTAGGGAGAGAATCTTCAGCTTCAGCCGCGAAGCAATTCAGAAGCTGAAAGCAAGAGCTAACAACAGAAAATGGACGGAGGGTGCTAACTCCGTTGAGCTGTTACGGAAAAGGAGTAACGACAATCTTCTACAAAAAGATAACGGTAACGGTAAGGTAACGACACTCCTCGAGAATTGGTTCAAGAGCGCGGCTGAAACAGAAACGGTTACAACTGTCGAGATTTCGTCGTTTCAATCCGTATGCGCGCTGCTGTGGCGTGCGGTCACTCGCGCAAGGAAATTGCCGGCTTCGAAAACGACGACGTTTAGAATGGCGGTTAACTGTCGCCACCGGTTAGAGCCGAAATTGGAACCTTTCTACTTCGGAAACGCGATTCAGAGCATTCCGACGTTCGCCACCGCCGCCGACGTGCTCTCCCACGATCTGCGTTGGTGCGCGGAGCAGCTCAACAAGAACGTTAGGGCTCATAACGACGCTACAGTGAGGCAGTTCGTGAAGGATTGGGAATCGAACCCGCGGTGTTTTCCGCTGGGGAATCCCGACGGCGCGTCGATCACGATGGGGAGCTCGCCAAGGTTTCCGATGTACGACAACGACTTCGGTTGGGGAAGGCCGTTGGCGGTGAGGAGCGGTGGCGCGAACAAGTTCGATGGAAAGATTTCAGCGTTTCCGGGAAGAGACGGAAGCGGCACCGTCGATTTGGAGGTGGTTTTGGCTCCGGAGACGATGGCCGGTTTGCAGTCTGATCCTGAGTTTATGACGTACGCTACTGGACAGTTATGA 1446 0.5284 MPSSAPTLVSKCTIFPDQKSSLSKLKLSVSDLPMLSCHYIQKGCLFTQPTSLSSNQLIPLLKSALSRTLSLFPPLAGRLTTDSHGYVYISCNDAGVHFLHAAAPALNVLDLLSPLDVHKSFREFFTFDRKVSYSGHYSPIMAVQVTELADGFFIGISVNHAVTDGTSFWNFFNTFAQECRGASKSIRNVPDFRRDSVLISEAVLRLPEGGPKVTFNADAPIRERIFSFSREAIQKLKARANNRKWTEGANSVELLRKRSNDNLLQKDNGNGKVTTLLENWFKSAAETETVTTVEISSFQSVCALLWRAVTRARKLPASKTTTFRMAVNCRHRLEPKLEPFYFGNAIQSIPTFATAADVLSHDLRWCAEQLNKNVRAHNDATVRQFVKDWESNPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLQSDPEFMTYATGQL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0980 481 Gene3D - 7 205 IPR023213 -
Ahy17g0980 481 Pfam Transferase family 7 474 - -
Ahy17g0980 481 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 476 - -
Ahy17g0980 481 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 6 476 - -
Ahy17g0980 481 Gene3D - 220 471 IPR023213 -
Ahy17g0980 481 SUPERFAMILY CoA-dependent acyltransferases 36 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0980 Ahy-Chr17 12218447 12220256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0980 16 464 Monolignol Biosynthesis Gene Families AT5G48930 28.105 3.88e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0980 - - gmx:100779616 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0980 17 12218447 12220256 Ahy20g1464 20 40660665 40662579 ECH
Ahy17g0980 17 12218447 12220256 Ahy17g0980 17 12218447 12220256 ECH
Ahy17g0980 17 12218447 12220256 Ahy7g0808 7 10214634 10216449 hybridization
Ahy20g1464 20 40660665 40662579 Ahy17g0980 17 12218447 12220256 PCT
Ahy10g1075 10 26330004 26331934 Ahy17g0980 17 12218447 12220256 PCT