Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0977 ATGGAATCGAAAGGTGGGAGCAGTGGAAGCAAGTGTGGGCGTTGGAATCCGACGGCAGAACAAGTTTCGGTTCTGAGTGAACTGTTCAGCTCTGGTCTGCGCACCCCAACCACTGATCAGATTCAGCGTATCTCCAACCATCTCAGCTTTTACGGCAAGATTGAGAGTAAGAATGTCTTCTATTGGTTTCAGAACCATAAAGCTAGGGACAGACACAACAAGCGCCGCAAGCTCTCTTCTTCCTTTCCTCATCACTCCAAACATCTCAATCTTCTTCACTCTCAAAGTTTAGCTGAGATGTATCAAGTTTCACAGCCTGAGAATAATAATAGGGTGATTGAGACTCTTCAGCTCTTTCCCTTAAACTCTTATGTTGAATCCGAATCAGAGAAGCTGAGGGTGCATGCAAATGATGAAAATGGTGATCATCATCATCATCATCAATGCATGGATCATGATGATGATACTATGTTCTCATACACATTAATGGGAGAACAAATGGAGTATCCTCCATTGGACCTGCGCTTGAGCTTCCTCTAA 540 0.4389 MESKGGSSGSKCGRWNPTAEQVSVLSELFSSGLRTPTTDQIQRISNHLSFYGKIESKNVFYWFQNHKARDRHNKRRKLSSSFPHHSKHLNLLHSQSLAEMYQVSQPENNNRVIETLQLFPLNSYVESESEKLRVHANDENGDHHHHHQCMDHDDDTMFSYTLMGEQMEYPPLDLRLSFL* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0977 179 Pfam Homeodomain 12 72 IPR001356 GO:0003677
Ahy17g0977 179 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 4 145 IPR044555 GO:0003700|GO:0099402
Ahy17g0977 179 CDD homeodomain 14 74 IPR001356 GO:0003677
Ahy17g0977 179 PANTHER WUSCHEL-RELATED HOMEOBOX 7 4 145 - -
Ahy17g0977 179 Gene3D - 11 79 - -
Ahy17g0977 179 SMART HOX_1 10 77 IPR001356 GO:0003677
Ahy17g0977 179 ProSiteProfiles 'Homeobox' domain profile. 8 73 IPR001356 GO:0003677
Ahy17g0977 179 SUPERFAMILY Homeodomain-like 9 76 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0977 Ahy-Chr17 12199188 12200782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0977 6 179 Wox Gene Family AT3G11260 52.778 5.80e-58 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ahy17g0977 Homeodomain 2.20E-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0977 - - adu:107457681 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0977 17 12199188 12200782 Ahy7g0805 7 10197577 10199008 hybridization
Ahy20g1461 20 40003504 40005160 Ahy17g0977 17 12199188 12200782 PCT
Ahy10g1073 10 26292804 26294450 Ahy17g0977 17 12199188 12200782 PCT
Ahy17g0977 17 12199188 12200782 Ahy20g1461 20 40003504 40005160 PCT
Ahy17g0977 17 12199188 12200782 Ahy10g1073 10 26292804 26294450 PCT