Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0976 ATGGAAGCGAAGGAGCAGGATGTGTCGTTGGGAGCTAACAAGTTCCCGGAAAGGCAGCCGATCGGTACGGCGGCGCAGAGCCAAGACGAGCCGAAGGACTACCAGGAGCCACCGCCAGCTCCACTGTTCGAGCCATCTGAGCTAACGTCATGGTCATTCTACAGAGCCGGAATCGCGGAGTTCGTTGCCACTTTCCTTTTTCTCTACATCACCATCTTGACCGTCATGGGCGTCAACAGAGCACCCAACAAGTGCGCTTCCGTCGGTATCCAAGGTATCGCTTGGGCCTTCGGTGGTATGATCTTCGCTCTCGTTTACTGCACCGCCGGTATCTCAGGGGGTCATATAAACCCGGCCGTGACGTTTGGGTTGTTCTTGGCGAGGAAGTTGTCGTTGACAAGGGCGGTTTTCTACATAGTGATGCAGTGCCTTGGAGCTATCTGCGGTGCAGGTGTGGTGAAGGGATTCGAGGGAAAGAACTTGTACGGAACCTATGGAGGTGGTGCCAACAAGGTGAACGACGGTTACACCAAGGGCGATGGCCTTGGTGCTGAGATCGTTGGTACCTTCATCCTTGTCTACACCGTCTTCTCCGCCACTGATGCTAAGCGTAACGCCAGAGATTCACACGTCCCTATTTTGGCACCGTTGCCAATTGGATTCGCTGTGTTCTTGGTGCACTTGGCCACCATCCCTATCACCGGAACTGGTATCAACCCTGCTCGCAGTCTTGGTGCTGCTATCATCTTCAACAAGCACGATGGATGGCATGAGCACTGGGTGTTCTGGGTTGGACCATTCATTGGTGCAGCTCTTGCAGCTCTCTACCACGTGGTGGTAATCAGAGCCATTCCCTTCAAGTCCAAGTGA 870 0.5414 MEAKEQDVSLGANKFPERQPIGTAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNRAPNKCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFEGKNLYGTYGGGANKVNDGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKHDGWHEHWVFWVGPFIGAALAALYHVVVIRAIPFKSK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0976 289 TIGRFAM MIP: MIP family channel proteins 59 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy17g0976 289 Gene3D Glycerol uptake facilitator protein. 40 287 IPR023271 -
Ahy17g0976 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 289 IPR034294 -
Ahy17g0976 289 CDD MIP 55 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy17g0976 289 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy17g0976 289 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy17g0976 289 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy17g0976 289 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy17g0976 289 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy17g0976 289 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy17g0976 289 Pfam Major intrinsic protein 47 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy17g0976 289 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Ahy17g0976 289 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 1 289 - -
Ahy17g0976 289 MobiDBLite consensus disorder prediction 1 39 - -
Ahy17g0976 289 SUPERFAMILY Aquaporin-like 47 281 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0976 Ahy-Chr17 12177020 12179629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0976 1 289 Major Intrinsic Protein MIP AT4G23400 86.505 4.20e-174 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0976 K09872 - gmx:100775766 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0976 17 12177020 12179629 Ahy17g0976 17 12177020 12179629 ECH
Ahy17g0976 17 12177020 12179629 Ahy7g0803 7 10163197 10165061 hybridization
Ahy20g1457 20 38844329 38847291 Ahy17g0976 17 12177020 12179629 PCT
Ahy10g1069 10 26028347 26031804 Ahy17g0976 17 12177020 12179629 PCT
Ahy17g0976 17 12177020 12179629 Ahy20g1457 20 38844329 38847291 PCT
Ahy17g0976 17 12177020 12179629 Ahy10g1069 10 26028347 26031804 PCT