Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0975 ATGGAGTTCACCTCTTTTTCATGGGAAATCAATTCTAAAGAAGATCCAAGCATACCACAAGACTCCTATTTCGATGATTGTTTTTCCATCATCTTTAGATTCACCAAAGAATTGATCCAAATAACTCAAAGCACAAATTTTCCTTCTACTACAAGTACGGCCAATGAATCGTTCTTGGTTCCTTCTGATATCCTATGTAACTTCAGAGAAAACACTGCATTCTTACATGAAACCTTCTCTTCAGTGCCTATATCCCCTGAGATATTGGACCAAATTTTACCTGTCATGGGCGAAACTGCAAGAACGATTCTAAGCCATGAAGGGTGTGACTCCACCAATATGCGGGGTATTTTTGTGAACCTCCATGTTACCACGCGCATTGTTATTGAAGATTCTGATTTCTATAATGATGATATCGGTCAAAATGTTCCTGAACCAGCTCAATTCGTGAATCTGTTGGAGAGATCGAAAATTGATGAGCAAGATGATGATGTTGAAGAACAATGTGCTATTTGCTTGGAAGAGTTTGGACATGGTATTGAAGATTCACGTGTAGCAATTGTTCGCACAAATTGCTCGCATGTGTTCCATGAATGTTGTATATTCCGTTGGTTTCGGCGTTGTGCCGACCGTCACTCGCCCTATTCTTGCCCATTGTGCCGCTGCAACATATTTCCAACCTCACCGAGAGATGAATAG 699 0.4063 MEFTSFSWEINSKEDPSIPQDSYFDDCFSIIFRFTKELIQITQSTNFPSTTSTANESFLVPSDILCNFRENTAFLHETFSSVPISPEILDQILPVMGETARTILSHEGCDSTNMRGIFVNLHVTTRIVIEDSDFYNDDIGQNVPEPAQFVNLLERSKIDEQDDDVEEQCAICLEEFGHGIEDSRVAIVRTNCSHVFHECCIFRWFRRCADRHSPYSCPLCRCNIFPTSPRDE* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0975 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 226 IPR013083 -
Ahy17g0975 232 CDD RING-H2 169 221 - -
Ahy17g0975 232 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 82 226 - -
Ahy17g0975 232 SUPERFAMILY RING/U-box 159 227 - -
Ahy17g0975 232 SMART ring_2 169 220 IPR001841 -
Ahy17g0975 232 ProSiteProfiles Zinc finger RING-type profile. 169 221 IPR001841 -
Ahy17g0975 232 Pfam Ring finger domain 168 221 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0975 Ahy-Chr17 12168746 12169444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0975 167 225 C3H Transcription Factor Family AT4G12190 38.983 6.48e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0975 - K11982 adu:110273516 353.984