Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0972 ATGGAATCCACCGTTTTTTGGTTGCGAATTACTCCCATTGAAAACCAAGGCATACCACAAGAGTTTTATTTCGGTGATTGTTTCTCCATCATTTTCAATTGCACCCAAGAATTGATCCAAATTACCCAAGGCTCTGATGTTGAATTTTCTTCTACTACAACTACTGAAGCAATCTTGGTTCCCTCAGATATCCTATTGCCTGCATCCCCTGAGTTATTGGACCAAATTTTACCTGCCATAGGCGAAACTGCAAGAAGGATTCTAAGCCGTGAAGGGTGTGACTCCAACACGCTGGAGATTGTTGTGAACCTTCACGTTGTTACCAGGCGCAACATTGTTCAAGATTCTGATATCTATAATGATGATCTCTGTGAAAACGTTCCTGAACTAGCACAACTCGTGAATCTGTTAGAGAGATCCAAAATTGATGAGCAAGATGATGACGCTGAATGCGCTATTTGCTTGGAGAAGTTTGGCCATGGTAACGAAGATTCAAGTGTAGAAGTTGTTCGCATAAATTGCTCGCATGTTTTTCATGATCGTTGCATGCTCCGCTGGCTCCGATGCTGTGCCGACCATCAGTCGCCGTATTCTTGCCCATTGTGCCGCTGCCTCATATCTCCAACTTCACACGGTGACGATGAATAG 648 0.4367 MESTVFWLRITPIENQGIPQEFYFGDCFSIIFNCTQELIQITQGSDVEFSSTTTTEAILVPSDILLPASPELLDQILPAIGETARRILSREGCDSNTLEIVVNLHVVTRRNIVQDSDIYNDDLCENVPELAQLVNLLERSKIDEQDDDAECAICLEKFGHGNEDSSVEVVRINCSHVFHDRCMLRWLRCCADHQSPYSCPLCRCLISPTSHGDDE* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0972 215 Pfam Ring finger domain 150 203 IPR001841 -
Ahy17g0972 215 PANTHER RING ZINC FINGER PROTEIN-RELATED 132 209 - -
Ahy17g0972 215 ProSiteProfiles Zinc finger RING-type profile. 151 203 IPR001841 -
Ahy17g0972 215 CDD RING-H2 151 203 - -
Ahy17g0972 215 PANTHER RING ZINC FINGER PROTEIN-RELATED 132 209 - -
Ahy17g0972 215 SMART ring_2 151 202 IPR001841 -
Ahy17g0972 215 SUPERFAMILY RING/U-box 145 208 - -
Ahy17g0972 215 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 210 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0972 Ahy-Chr17 12090702 12091420 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0972 144 204 C3H Transcription Factor Family AT5G41440 39.344 4.13e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0972 - - ahf:112762800 315.849