Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0967 ATGGCCTCCGCCTTCAGGGACCGCACCTCCGAGTTCCGGTCGGTGACGGAGACTCTCAAGAAGAAGATCGGAGCCCCCACTCCGCCACCGTTGCCTAACCAACCGGAAAATGCTCCCTCCTCCACCGACTCTCCGGTTCCAAATTCCAGATCCGAATTCAACCGAAAGGCCTCTCGGATCGGTTTGGGAATCCACGATACTTCACAGAAGATCGCAAGGCTCGCCCAACTGGCGAAGAAATCGTCGATTTTCAATGATCCGATTGTTGAGATACAGGAACTGACGGCTGTGATTAAGAACGAGATCACGGCGCTGAACGCGGCTCTTTCGGATTTACAGACGATTCAGAACATGGAGATTGCTGATGGGATGTACTCGGAGGATAGGGTTGTTCACTCCAATGCCGTTTGTGATGACTTGAAGAGCAGGCTCATGGGCGCCACAAAGAAACTCCAAGATGTCTTGACCACTAGAACAGAGAATATCAAGGCTCATGAGAATAGGAAGCAGATATTTTCCAAGAATACATCCAGAGAGAACCCTTTTCAGCATCACCCAAAGCCATCCCATGTACCACCCCCATGGTCGAATTCATTAAATCCATCTGAAGACTTGCAACAACAGTCAGCACTAACTTCAAATGGAGTACCAGTTGGCAATCAACTAAGACGAAGGTTAGCTGTGGACAATGCTCCAACCCCCCAAATGGAAATGTCTATGGTACAGCAGGTTGTTCCTCACCAAGATAATTATGCTCAAAGTCGGGCAACTGCACTGCACAGTGTTGAATCTACTATCACAGAACTTAGTGGGATCTTCACACATTTGGCTACAATGGTTGCCCAGCAAGGGGAACTAGCCATCAGGATCGATGACAACATGGAGGAAACATTGGCAAATGTTGATGGAGCTCACAGTTCTTTATTGAGGCATCTTAACAGAATATCATCAAATAGGTGGCTTCTAATTAAGATATTTGCTATTTTGATATTTTTCCTAATGATCTTCATATTCTTTGTGGCCTAA 1026 0.4669 MASAFRDRTSEFRSVTETLKKKIGAPTPPPLPNQPENAPSSTDSPVPNSRSEFNRKASRIGLGIHDTSQKIARLAQLAKKSSIFNDPIVEIQELTAVIKNEITALNAALSDLQTIQNMEIADGMYSEDRVVHSNAVCDDLKSRLMGATKKLQDVLTTRTENIKAHENRKQIFSKNTSRENPFQHHPKPSHVPPPWSNSLNPSEDLQQQSALTSNGVPVGNQLRRRLAVDNAPTPQMEMSMVQQVVPHQDNYAQSRATALHSVESTITELSGIFTHLATMVAQQGELAIRIDDNMEETLANVDGAHSSLLRHLNRISSNRWLLIKIFAILIFFLMIFIFFVA* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0967 341 MobiDBLite consensus disorder prediction 1 52 - -
Ahy17g0967 341 MobiDBLite consensus disorder prediction 160 208 - -
Ahy17g0967 341 Gene3D - 48 304 - -
Ahy17g0967 341 CDD SNARE_syntaxin5 252 327 - -
Ahy17g0967 341 ProSitePatterns Syntaxin / epimorphin family signature. 255 294 IPR006012 GO:0005484|GO:0006886|GO:0016020
Ahy17g0967 341 MobiDBLite consensus disorder prediction 37 52 - -
Ahy17g0967 341 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 249 311 IPR000727 -
Ahy17g0967 341 SMART tSNARE_6 244 311 IPR000727 -
Ahy17g0967 341 SUPERFAMILY t-snare proteins 48 304 IPR010989 GO:0016020|GO:0016192
Ahy17g0967 341 PANTHER SYNTAXIN-31 4 340 - -
Ahy17g0967 341 Pfam SNARE domain 286 337 IPR000727 -
Ahy17g0967 341 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 5 21 IPR021538 -
Ahy17g0967 341 PANTHER SYNTAXIN 4 340 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0967 Ahy-Chr17 11940083 11944458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0967 1 341 SNARE and Associated Proteins AT5G05760 65.497 6.58e-149 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0967 K08490 - gmx:100777383 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0967 17 11940083 11944458 Ahy17g0967 17 11940083 11944458 ECH
Ahy17g0967 17 11940083 11944458 Ahy7g0794 7 10013258 10017662 hybridization