Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0961 ATGTGGCCTTGGAGTTCAGAGACCGATAAGATTGCTTTGCTTGTTTTGAAGGACAAGCTTACCAATGGCGATCCTCATGCTATACCATCATGGAATGAGTCTCTACATTTCTGTGAATGGCAGGGCGTTACATGCAGTCGCCGCCACATGAGAGTCTCATCCCTACAACTGCAAAATCAATACTGGGGTGGTATTCTTGCGCCATCCTTAGGAAATCTAACGTTCCTCAAGGAGATCAATTTTACTAACATCAACTTGCATGGTGAAATTCCAGGAGAAGTTGGTCGTTTAAAGAGGCTGAAGATTCTTGACTTGAGGAACAATAATCATGGTGGTCATATTCCTGTGGAGATAATAAATTGTTCAAGCCTTGAGGTGATTATATTGATGTACAATAATTTAACTGGCAAAGTCCCTTCATGGTTTGGTTCTATGGTGCAACTCACTCAATTGGGGCTTGCAGCCAACGGTTTTGTTGGCAATATCCCGCCTTCTTTGGGGAATCTTTCATCGCTCGAGAAGTTGTCATTTTTACAAAATCATATGGAAGGAAGCATAACTCCGGCTTTGGGTAGATTGTCGAATTTGAAATTTTTGGCTTTGAGTGCAAATAGTTTTTCTGGCCTATTTCCTCCTTCACTTTACAACCTTTCAAATATTCAAACTTTTTATTTAGCGGGCAACCAATTAGCGGGTAATCTTCTCTCAAATATACCTCTGGCTTTTCCCAATCTTCAAACTTTTGCGTGTGGAAGGAACCAATTCACTGGTATTTTTCCATCTTCAATATCCAATCTTTCCGAATTGCAATTTTTTGATATTGCAGAAAATGATTTTCATGGACCAATTTCTCCTACTTTGGGAAGTTTACACAAACTCTGGAGATTCAATGTTGGTCTTAATAGATTCGGGAGCGGAAGCACTCACGATTTGGATTTTCTTTCTTCATTAAAGAATTGTACTCAATTGCAAAAGCTAGGCTTTTATCACAATTCTTTAGGCGGTGTATTGACCGATCTCATAGGCAACTTATCAAGCAATCTCGTTTGGCTTGCTATGGGGTCCAATCAAATATCCGGAAGGATACCTGAAGGAATTGGAAAACTAGTCAACCTAGCATCACTTGATATGGAGTTGAATTTTCTTGAGGGAACAATTCCAGATTCAATAGGAAAGCTAAAAAATCTTGGAGTGTTGTGGTTGGATGGAAATAAGTTCTATGGCAACATCCCTCTTGTCATTGGTAACCTTACTGTGCTGTCTGACGTTGATCTGAGCTCAAATAAATTTGAAGGACTCATTCCCTTTACACTTGGATACTGCACCAACATGCAAAAATTTGCTGCATGGGGAAACAACTTAAGTGACTTAGTGCTCGTACTAGAAGGAAACTCATTCCATGGAAGTATACCTTCATCCTTGGGATCTCTACTATCCCTTGAAATCTTAGACCTTTCTAATAACAACTTCTCAAGCTCAATCCCGCATCAACTTGTGAACCTCACCTTGCTGAATACTTTGAACTTATCTTTCAACCATCTCTCTGGTGAAGTCCCGGTAGGAGGAGTATTTAATAACATCACAGCAATATCACTCACTGGAAACAAAGATCTTTGCGGCGGGATACCTCAATTGAATCTTCCTGCATGCCCTGTGTTGCCATTAAAGAAGAAACACAATAGATCTATTAAAAGGAGAGTTATCCTCTTCATTGTATTTGGAGGGATACTAATCTCTTTTGTAGCTTTTATAAGTATATATCTTTTCAAGAAAAAGGTAAAAAAGTTACCCACTACTTCTCTAGCTTTGCAATATCGCTATGTGAAGGTTTCTTATGGAGAGTTACATCAAGCAACCAATGGATTTTCTTCATCCAATTTAGTTGGCACAGGAAGCTTTGGTTCTGTGTATAGAGGAACCCTTGTGCATTTTGAGAGACCTGTGGCTGTGAAGGTGTTGAAGCTTCAAACAAGCGGGGCATCCAAAAGTTTCATGGTTGAATGCAATGCTCTAGGAAAAATCAAGCACAGAAACCTTGTCAACATATTGACTTGTTGTTCAAGTGTTGACTACAAAGGGAATGATTTCAAGGCTATAGTGTTTGAGTTCATGCCTAATGGGAATCTAGAAGCCTTGTTGCACAACACTATTGAAGATAGCGTGTCCACAAATCTGAGTCTCAACCTAATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTCAGAGAAAGTTGTAGTTCATTGTGATATAAAGCCAAGTAATGTTCTACTTGATGACGAAGTTGTTGCTCATTTGGGAGACTTTGGATTAGCTAGACTCATTCATGGTGCCGCAAGTCGTTCTAGCAGTGGTCAAGCTACTTCCTCTACAATTAAGGGAACCATCGGATATCTTCCACCAGAGTATGGAGCAGGTGGCTCAGTGTCACCGCAAGGAGACATGTATAGCTATGGAATTCTCCTTTTGGAGATGCTCACTGGAAAGAAGCCAACTGATACCATGTTTGGTGAAGGTCTGAGCTTGCACAAGTTCTGTAAAAAGGCAATTCCTGAAGGAATCACAGAGATTGTTGATTCCCGATTGCTGGTTCCATTTGATGAAGGAGAAAGAAAGATCACACAACATCAAAATATCAAGGAGTGTTTAGTTTCGTTTGCTAGGATTGGAGTTGCATGTTCTGAAGAATTTCCCTCTCAACGGATGAACATTAAAGATGCCATAATGGAATTGCATGCGATTAAACAAAAATTGCTACATTAA 2787 0.3965 MWPWSSETDKIALLVLKDKLTNGDPHAIPSWNESLHFCEWQGVTCSRRHMRVSSLQLQNQYWGGILAPSLGNLTFLKEINFTNINLHGEIPGEVGRLKRLKILDLRNNNHGGHIPVEIINCSSLEVIILMYNNLTGKVPSWFGSMVQLTQLGLAANGFVGNIPPSLGNLSSLEKLSFLQNHMEGSITPALGRLSNLKFLALSANSFSGLFPPSLYNLSNIQTFYLAGNQLAGNLLSNIPLAFPNLQTFACGRNQFTGIFPSSISNLSELQFFDIAENDFHGPISPTLGSLHKLWRFNVGLNRFGSGSTHDLDFLSSLKNCTQLQKLGFYHNSLGGVLTDLIGNLSSNLVWLAMGSNQISGRIPEGIGKLVNLASLDMELNFLEGTIPDSIGKLKNLGVLWLDGNKFYGNIPLVIGNLTVLSDVDLSSNKFEGLIPFTLGYCTNMQKFAAWGNNLSDLVLVLEGNSFHGSIPSSLGSLLSLEILDLSNNNFSSSIPHQLVNLTLLNTLNLSFNHLSGEVPVGGVFNNITAISLTGNKDLCGGIPQLNLPACPVLPLKKKHNRSIKRRVILFIVFGGILISFVAFISIYLFKKKVKKLPTTSLALQYRYVKVSYGELHQATNGFSSSNLVGTGSFGSVYRGTLVHFERPVAVKVLKLQTSGASKSFMVECNALGKIKHRNLVNILTCCSSVDYKGNDFKAIVFEFMPNGNLEALLHNTIEDSVSTNLSLNLMQRVNIALDVAFALDYLHNDSEKVVVHCDIKPSNVLLDDEVVAHLGDFGLARLIHGAASRSSSGQATSSTIKGTIGYLPPEYGAGGSVSPQGDMYSYGILLLEMLTGKKPTDTMFGEGLSLHKFCKKAIPEGITEIVDSRLLVPFDEGERKITQHQNIKECLVSFARIGVACSEEFPSQRMNIKDAIMELHAIKQKLLH* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0961 928 SMART serkin_6 622 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0961 928 Pfam Leucine rich repeat 99 157 IPR001611 GO:0005515
Ahy17g0961 928 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 12 477 - -
Ahy17g0961 928 Gene3D Phosphorylase Kinase; domain 1 584 703 - -
Ahy17g0961 928 Pfam Leucine rich repeat N-terminal domain 7 46 IPR013210 -
Ahy17g0961 928 Gene3D Ribonuclease Inhibitor 305 554 IPR032675 -
Ahy17g0961 928 Pfam Protein kinase domain 624 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0961 928 Gene3D Ribonuclease Inhibitor 184 304 IPR032675 -
Ahy17g0961 928 Gene3D Ribonuclease Inhibitor 5 183 IPR032675 -
Ahy17g0961 928 ProSitePatterns Protein kinases ATP-binding region signature. 628 651 IPR017441 GO:0005524
Ahy17g0961 928 SUPERFAMILY L domain-like 6 303 - -
Ahy17g0961 928 SUPERFAMILY L domain-like 313 540 - -
Ahy17g0961 928 SUPERFAMILY Protein kinase-like (PK-like) 604 919 IPR011009 -
Ahy17g0961 928 PANTHER LRR RECEPTOR-LIKE KINASE 469 926 - -
Ahy17g0961 928 PANTHER LRR RECEPTOR-LIKE KINASE 12 477 - -
Ahy17g0961 928 Gene3D Transferase(Phosphotransferase) domain 1 704 927 - -
Ahy17g0961 928 ProSiteProfiles Protein kinase domain profile. 622 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0961 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 754 766 IPR008271 GO:0004672|GO:0006468
Ahy17g0961 928 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 469 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0961 Ahy-Chr17 11780528 11783815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0961 4 925 Receptor kinase-like Gene Family AT3G47570 40.849 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy17g0961 Pkinase 3.10E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0961 - - ahf:112766492 1820.82