Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0960 ATGCACTTGTCGCACTGCATAATGATAATGATCATCTTCATTATGTTTCTCTTATCTATTGCTTCACAAATAGAGTACATGACATCTGCTGCAGTGACCATGCCCTTGAGTTCAGAGACCGATCAGATGGCTTTGCTTGCTTTGAAAGACAAGCTTACCAATGGGGACCCGGACGCTCTTCCATCATGGAATAAGTCTCTCCATTTTTGTGAATGGGAGGGGGTAATATGCAGTCGCCGCCACAAGAGAGTCACATCCTTGCAACTACAAAATCAAGATTTGGGTGGCATTCTTGCACCTTCCTTGGGTAATCTAACATTCCTCAGGGAGATGAGTCTTACTAGCATCAACTTACATGGTCATATTCCAAGAGAAGTTGGTCATTTGAAGAGACTGCAGATTCTTGATTTGAGGCAAAATAATCTTCATGGAGAGATTCCTATAGAGATGATAAATTGTTCAAGCCTTCAAGTAATTATATTGCTATACAATAATCTAACTGGCGAAGTTCCTTCATGGTTTGGTTCTATGATGCAACTTACTCAACTGGGGCTTGGAGCCAACGGGTTTGTTGGTAGTATCCCACCTTCATTGGGAAATCTCTCATCTCTTGAGAAGTTGTCACTTGCATACAATCAATTGGAAGGAAGCATAACTCCAACTTTGGGTAGGTTGTCAACTTTGAAATTTTTGGGTTTGGGTGTAAATAAGTTTTCTGGTCAAGTTCCTCCTTCACTTTACAACCTTTCAAATATTCAAGTTCTTGATTTCACGGAAAACCAGTTAGTGGGTAATTTTCTCTCAAATTTACCTATGGCTTTTCCCAATCTTGAGATACTTTTGTGTGGAGGGAACCGATTCACCGGTACTTTTCCATCTTCAATATCCAACCTTTCTGAACTACAACAGTTTCAAATATCCAAAAATGTTTTTTATGGACCAATTTCTCCTACCGTAGGAAGTTTACACAAACTCCAGATATTTAATGTTGGACGGAATAGATTTGGGAATGGAAGAGCTCATGATTTGGATTTCCTTTCCTCATTGACTAATTGTACTCAATTGCAGAAATTAGGCTTTTATGAAAATTATTTAGGTGGAGTATTTCCAGATATCATAAGCAACTTATCAACAAATCTCGTTTTGCTTGGTATGGCGTTGAATCAAATATCTGGAAGGATACCAGAAGGAATTGGAAAACTAGTCAACCTAGCAACACTTGATATGGAGGGCAATTTTCTTGAGGGAACAATTCCAGATTCAATAGGAAAGCTAAAAAATCTTGGAGTGTTGTGGTTGGATGAAAATAAGTTCTATGGCAACATCCCTCTTGTCATTGGTAACCTTACTATGCTGTCTGACGTTGATCTGAGCTCAAATAAATTTGAAGGACTCATTCCCTTTACACTTGGATACTGCACCAACATGCAAAGATTTTCTGCATATGGAAACAACCTAAGTGGTAATATACCCAATCAAACATTTGGCTACCAGCAAGGTCTAATACAATTGTCTTTATACTCCAACTCTTTTACTGGCTCCATTCCTTCTGATCTTGGAAACTTGAACCATCTTTCCATCTTGCATTTACAAGATAACAAGCTAATTGGTGAGATTCCCGTGAGGCTTAGTGCTTGCACTGCTTTAACGGAGCTGGTACTAGAAAGAAACTCATTCCATGGAAGTATACCTTCATTCTTGGGATCTCTACTATCCCTTGAAATCTTGGACCTTTCTAATAACAACTTCTCAAGCACAATCCCACATGAACTTGTGAATCTCACGTTTCTGAATGCTTTGAACTTATCTTTTAACCATCTCTCTGGTGAGGTCCCGGTAGGAGGGGTATTCAATAATGTCACAGCAATATCACTCGTCGGAAACAAAGATCTTTGTGGTGGAATACCTCAATTGAATCTCCCTACATGCTCTACGTTGCCCTTAAAGAAGAAACACAAGAGATCTGTTAAAAAGAAAGTCATCCTCATAATCGCATTTGGAGGGGTTCTAATCTCTTCCGTTGCCTTTATTATTAGTATATATCTTCTCAAGAAGAAGCAAAAAAGGTTATCCACTCCTTCTCTAGCTTTGCAATATGGCTATGTGAAGGTTTCTTATGGAGAGCTACATCAAGCAACCAATGGATTTTCTTCCTTAAATTTAATTGGCACAGGAAGCTCTGGCTCAGTATATAGAGGAACCCTTCTCCATTTTGAGAGACCTGTTGCTGTGAAGGTGTTGAATCTTCAAACACGCGGAGCATCGAAGAGTTTCGTGTCCGAATGCAAAGCTCTAGGAAAATTGAAGCACAGAAACCTTCTCAATATATTGACCTGTTGTTCAGGTGTTGATTACAAAGGGGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTTTAGAAAGCTTGTTGCACAACAACATTGAAGATAGCGAGTCCACAAATCGGAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTCAGAGGAAGCTGTAGTTCACTGTGATGTTAAGCCAAGTAATGTTCTACTTGATGATGACATTGTTGCTCACCTGGGAGACTTTGGGTTAGCTAGGCTTCTTCATGGGCATGCCACAAGCTATACTAGTAGTAATCAAGCTAGTTCCTCTGTTATTAAGGGAACCATCGGATACCTTCCACCAGAGTATGGAGCAGGTGGGTCAGTATCACCACAAGGAGACATCTATAGCTATGGAATTCTTCTTTTGGAAATACTAACCGGAAAGAGACCAACGGATGGCATGTTTGGTGAAGATTTAAGCCTACACAAATTCTGTAAACTGGCAATTCCAGAAGGAATTACTGAGATTGTTGATTCAAGATTGATAACTCCGTTTGATGAAGGAGAAAGAAGGATCACACAACAGAAAAACATGGAGTGTTTAGTGTCTTTTGCTAGGATTGGAGTTGCATGTTCTGAAGAGTTCCCCACTCAACGGATGAACATTAAAGATGTCATAATGGAGCTGCATGCAATTAAACAGAAACTGCTTCCTTAG 3069 0.3956 MHLSHCIMIMIIFIMFLLSIASQIEYMTSAAVTMPLSSETDQMALLALKDKLTNGDPDALPSWNKSLHFCEWEGVICSRRHKRVTSLQLQNQDLGGILAPSLGNLTFLREMSLTSINLHGHIPREVGHLKRLQILDLRQNNLHGEIPIEMINCSSLQVIILLYNNLTGEVPSWFGSMMQLTQLGLGANGFVGSIPPSLGNLSSLEKLSLAYNQLEGSITPTLGRLSTLKFLGLGVNKFSGQVPPSLYNLSNIQVLDFTENQLVGNFLSNLPMAFPNLEILLCGGNRFTGTFPSSISNLSELQQFQISKNVFYGPISPTVGSLHKLQIFNVGRNRFGNGRAHDLDFLSSLTNCTQLQKLGFYENYLGGVFPDIISNLSTNLVLLGMALNQISGRIPEGIGKLVNLATLDMEGNFLEGTIPDSIGKLKNLGVLWLDENKFYGNIPLVIGNLTMLSDVDLSSNKFEGLIPFTLGYCTNMQRFSAYGNNLSGNIPNQTFGYQQGLIQLSLYSNSFTGSIPSDLGNLNHLSILHLQDNKLIGEIPVRLSACTALTELVLERNSFHGSIPSFLGSLLSLEILDLSNNNFSSTIPHELVNLTFLNALNLSFNHLSGEVPVGGVFNNVTAISLVGNKDLCGGIPQLNLPTCSTLPLKKKHKRSVKKKVILIIAFGGVLISSVAFIISIYLLKKKQKRLSTPSLALQYGYVKVSYGELHQATNGFSSLNLIGTGSSGSVYRGTLLHFERPVAVKVLNLQTRGASKSFVSECKALGKLKHRNLLNILTCCSGVDYKGDDFKAIVFEFMPNGSLESLLHNNIEDSESTNRSLNLMQRVNIALDVAFALDYLHNDSEEAVVHCDVKPSNVLLDDDIVAHLGDFGLARLLHGHATSYTSSNQASSSVIKGTIGYLPPEYGAGGSVSPQGDIYSYGILLLEILTGKRPTDGMFGEDLSLHKFCKLAIPEGITEIVDSRLITPFDEGERRITQQKNMECLVSFARIGVACSEEFPTQRMNIKDVIMELHAIKQKLLP* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0960 1022 ProSitePatterns Protein kinases ATP-binding region signature. 722 745 IPR017441 GO:0005524
Ahy17g0960 1022 Gene3D Ribonuclease Inhibitor 40 154 IPR032675 -
Ahy17g0960 1022 Pfam Leucine rich repeat 548 607 IPR001611 GO:0005515
Ahy17g0960 1022 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Ahy17g0960 1022 Pfam Protein kinase domain 718 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0960 1022 Gene3D Transferase(Phosphotransferase) domain 1 798 1020 - -
Ahy17g0960 1022 ProSiteProfiles Protein kinase domain profile. 716 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0960 1022 SMART serkin_6 716 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0960 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 848 860 IPR008271 GO:0004672|GO:0006468
Ahy17g0960 1022 SUPERFAMILY Protein kinase-like (PK-like) 697 1013 IPR011009 -
Ahy17g0960 1022 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 35 1020 - -
Ahy17g0960 1022 Gene3D Ribonuclease Inhibitor 340 651 IPR032675 -
Ahy17g0960 1022 Gene3D Phosphorylase Kinase; domain 1 677 797 - -
Ahy17g0960 1022 ProSiteProfiles Leucine-rich repeat profile. 572 595 IPR001611 GO:0005515
Ahy17g0960 1022 SUPERFAMILY L domain-like 378 633 - -
Ahy17g0960 1022 PANTHER LRR RECEPTOR-LIKE KINASE 35 1020 - -
Ahy17g0960 1022 Gene3D Ribonuclease Inhibitor 176 339 IPR032675 -
Ahy17g0960 1022 SUPERFAMILY L domain-like 38 335 - -
Ahy17g0960 1022 SMART LRR_typ_2 401 425 IPR003591 -
Ahy17g0960 1022 SMART LRR_typ_2 449 472 IPR003591 -
Ahy17g0960 1022 SMART LRR_typ_2 201 225 IPR003591 -
Ahy17g0960 1022 SMART LRR_typ_2 570 594 IPR003591 -
Ahy17g0960 1022 SMART LRR_typ_2 522 546 IPR003591 -
Ahy17g0960 1022 SMART LRR_typ_2 129 153 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0960 Ahy-Chr17 11770884 11774578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0960 33 1021 Receptor kinase-like Gene Family AT3G47570 44.980 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy17g0960 Pkinase 4.50E-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0960 - - ahf:112766919 1582.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0960 17 11770884 11774578 Ahy17g0960 17 11770884 11774578 ECH
Ahy17g0960 17 11770884 11774578 Ahy7g0781 7 9799549 9802782 hybridization