Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0956 ATGGCTTCCGCAGCCTCTCCAAGAATACCCACCGAGACGGTGAAGAACGCCGTGGAGGCTCTCCTGAAGTGGCGAGATTCCAATTCCGAGTCTCACAAATCCAAACTCTTCGACGCCGACGAAGAATTCGTTTACTTAGTCGTCACTCTGAAAACCATCCCTCACAAATCCCGCGTTAACCCTTACAAGGTCCCTTTACCCCACTCTCTCCTCTCTCCCTTCAACGAAACTTGCCTCATCATCGACGACAGGTCCAAATCCAAACTCACTAAACAAGAAGCTCAAAAGAAGATCAAGGCCGATAACGTCGCCGTTTCCAAGGTCCTCAGGTTGTCGAAGCTGGCCTCCGATTACCGCCCTTTTGAGGCGAAGCGGAAGCTCTGTGATTCATATGATCTTTTTTTCGCTGATAAGAGAGTGGTGCCTTTGATGCCCAGGCTGTTGGGGAAGAAATTCTTTAAGAAGAAGAAGGTGCCGGTGCAGGTGGACTTGACTAAGAAGAATTGGAAGGAGCAGGTGGATAAGGCGTGTTCGTCGGCGCTTCTGTTTCTTGGAACGGGGACTTGTTGTGTTGTGAAGGTTGCCAAGGTTTCCATGGAGAGCGAGCAGATTGTTGAGAATATGATGGCTGCCATTGAGGGGGTTGTTGAGGTTGTGCCGAAGAAGTGGGCGAATGTGAGGTCCTTGCATGTTAAGCTTTACGAGTCGCTGGCGCTGCCTGTTTTCCAGGCTGTTCCGGAGGTGAAGTTGAGGATTGAGGGAAGTAAGGTTGAGGAGGCGGAGAAAGAGAAGCAGACGATGGAGGAGGAGGAAGAGGGCGAAGACCATAGTGGCGCGAAGGCGGTGAAGAAGAAAAAGGGGAGGATTCATGAAGTTAGATACATGGATAGTGAAGTTGGTGAGGATAATGTTGAAGATTTGGCAGGTAGTGAGGATGATGGTGGTGGTGTTGTTATGGAGGAAGATTTAAAGGACGCTGGAAAAGGTAGTGGAGAATTGGCGAATAAGAAGAGGAAGAAAGGGGCATTGAGTGAGTTGAGCAGTGTCAAAGAATTGAAAAAATCTGTTAAGAGAAGTGGTAAACAGGTTGAGGATGGAGATTCAGGAAAGAAGGGGAAGAATATCAAGAAGAAACTATCTCTATTGAAGTCAGAAGAAGCTGATTTGAAAAAGAAAGTGAGGGCCAAGAAAAGTAAGAAGGCTGCTTAA 1209 0.4789 MASAASPRIPTETVKNAVEALLKWRDSNSESHKSKLFDADEEFVYLVVTLKTIPHKSRVNPYKVPLPHSLLSPFNETCLIIDDRSKSKLTKQEAQKKIKADNVAVSKVLRLSKLASDYRPFEAKRKLCDSYDLFFADKRVVPLMPRLLGKKFFKKKKVPVQVDLTKKNWKEQVDKACSSALLFLGTGTCCVVKVAKVSMESEQIVENMMAAIEGVVEVVPKKWANVRSLHVKLYESLALPVFQAVPEVKLRIEGSKVEEAEKEKQTMEEEEEGEDHSGAKAVKKKKGRIHEVRYMDSEVGEDNVEDLAGSEDDGGGVVMEEDLKDAGKGSGELANKKRKKGALSELSSVKELKKSVKRSGKQVEDGDSGKKGKNIKKKLSLLKSEEADLKKKVRAKKSKKAA* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0956 402 Pfam Ribosomal protein L1p/L10e family 32 236 IPR028364 -
Ahy17g0956 402 MobiDBLite consensus disorder prediction 258 281 - -
Ahy17g0956 402 MobiDBLite consensus disorder prediction 258 379 - -
Ahy17g0956 402 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 5 300 - -
Ahy17g0956 402 MobiDBLite consensus disorder prediction 317 379 - -
Ahy17g0956 402 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 5 300 - -
Ahy17g0956 402 CDD Ribosomal_L1 14 241 IPR028364 -
Ahy17g0956 402 Gene3D - 87 179 IPR016095 -
Ahy17g0956 402 Coils Coil 250 277 - -
Ahy17g0956 402 SUPERFAMILY Ribosomal protein L1 12 242 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0956 Ahy-Chr17 11714193 11716237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0956 130 232 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 1.32e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0956 K14775 - ahf:112697689 652.899