Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0948 ATGGCCATGCCATTAAGTTCTGAGACTGATAAGCTTGCTTTGTTGACTTTGAAGGACAAGCTTACTAATGGTGACTCAAATGTTCTTCCATCATGGAATGAGTCTCTTCATTTCTGTGAATGGCAGGGCGTTACATGTGGTCGCCGCCACAAGAGAGTCTCAGCATTGCATTTGCAAAATCAAGACTTGGGTGGTACTCTTGCACCATCATTAGGAAATCTAACCTTCCTCAAGAAGCTCAATCTTACTGACCTCAACTTGTACGGTCAGATTCCAAGACAAGTTGGTCGTTTAAAGAGGCTGCAGATTCTTAGCTTCCAGCAGAATCATCTTCATGGTGAGGTTCCCCGGGAAGTTGGTCGATTGAAGTCGTTGTACGCTCTCGAACTAACGAGAAATAATCTTCAAGGTGAGATTCCTATGGAGCTAATCAACTGCTCAAGTCTTAAGAAAATTGACTTGTCCTACAACAATTTAACTGGGAAAGTTCCATCATGGTTTGGATCCATGATGCAACTTACTATGTTGGAGCTTGGATTCAATAATCTAGTTGGTAATATCCCACCAACCTTGGGGAATCTTTCATCACTTGATACATTGTATCTTGCAGGAAACAATTTGGAAGGTCCTATAATTCATGCTTTGGGAAGGTTGTCAAATTTGGAGTACCTCTCTTTGAGTACCAATAATTTGTCAGGCCAAGTTCCTAATGCATTCTACAACCTTTCAAATCTTCAAGTTCTTGATATAAGTAACAACAAATTAATGGGTCCTATTTCTTCAAATTTACATCTTGCTTTTCCCAATCTGTCTGTTTTTGTTGTTGCATCAAATCAATTCACTGACAACTTCCCATCTTCATTATGCAATCTGACAAGATTGATAGAATTTGATTTATCATTCAATAATTTTAGAGGGCTAATTCCTCCTACTTGGGGAAGCTCAAATAATCTTATCTACTTTGGCATTAATTACAATGGTCTAATAGGAAGTGGGAAAGCTCAAGATTTGGATTTCCTTTCCTCTTTAACCAATTGCACTCAGTTGTCATATTTGATTTTGCAAGGAAATAATCTTGGTGGTGTATTGCCAAATCTCATAGGCAACTTCTCTACCAATCTCACTGTGCTTGATATAGCCCATAATCAAATATCTGGAAGCTTGCCTCAAGAAATTGGAAACTTGGTCGGCTTAGGTTTACTTGCTATGAATAAAAATTCCCTTGAGGGAACAATTCCAGATTCAATTGGGAATCTTAAAAATCTAGTAAGATTATCCTTGGATGATAACAATCTCTCAGGTAATATTCCTGTTGCCATTGGCAATCTTACTATGCTGTCAGAAGTTTATATGGACTCAAATAATCTTGAGGGAAGCATTCCATTTACCTTAAGATATTGCACAAATATGCAGACTTTCGCTGCCGGGAACAACAATTTAAGTGGTAGCATACCAACTCAAACCTTTGAATACCAACAAGGTTTAGTAAATCTTGATTTAGCCAGCAACTCCATTACTGGTCCAATCCCTCCAGAGTTTGGTAACCTGAAGCATCTTTCTAAATTGTATCTATTTTCAAACAAGTTGTCTGGTGTCATTCCCATTGAACTTGGTGCTTGTTCTGCATTGATAGAGCTTTATCTAGATGTAAACTTCTTCCATGGAAATATACCTTCCTTCTTGGGTTCTCTAAGATCACTTGAATTCTTAGGACTTTCCAACAACAGCTTCTCAGGCACAATCCCACATGAACTTGAAAACTTGACACAATTGAATGCATTGGACCTTTCCAATAACCAGCTCTATGGCAAGGTTCCATTAGGAGGAATCTTTAGTAACATCACAGCAATATCACTCATTGGAAACAAGGATCTCTGTGGTGGGATAACTCAACTGAATTTCCCTCCATGTCCAAAGTTGCCCTCAAATAAACACAAGAGCTCTCTTAGAAAGAAAATTATTGTCATCAGTGTTATTGGAGGGATTTTGATCTCGTTCATTATTTTTGTTAGCATCTATTGTTTCATGAGGAAGCCCAAGAAGTTACCTTTTTTGCCATCATTGGAACATAAGTACTTGAGGGTTTCTTATGGAGAGCTACATCAAGCAACAAATGGATTTTCTTCATCCAATTTAGTTGGCACAGGAAGTTTTGGTTCTGTGTATAGAGGAACCCTTGTTCATTTTGAGAGACCTGTTGCTGTGAAAGTGTTGAACCTTCAAACACGCGGGGCATCAAAGAGTTTCATGGCCGAATGCAAAGCTCTAGGAAAAATCAAGCACAGAAACCTTATCAACATATTGACTTGTTGTTCAAGTGTTGATTACAAAGGGGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTCTAGAAACCTTGTTACACCACACTATTGAAGATAGCGAGTCAACAAGTCCAAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTTAGAGGAAGCTGTAGTTCATTGTGATATTAAGCCAAGCAATGTTTTACTTGATGATGACATGGTTGCCCACTTGGGAGACTTTGGATTAGCTAGGCTTGTTCATGGTGTCGCAAGCCACTCTAGCAGTGATAAAGGAAGTTCCTCAGTAATCAAGGGAACCATCGGATATGTTCCACCAGGTAAAATTAAAGATTTAATTTTTCTTTTTAATCTCTCTTGGTAA 2727 0.3847 MAMPLSSETDKLALLTLKDKLTNGDSNVLPSWNESLHFCEWQGVTCGRRHKRVSALHLQNQDLGGTLAPSLGNLTFLKKLNLTDLNLYGQIPRQVGRLKRLQILSFQQNHLHGEVPREVGRLKSLYALELTRNNLQGEIPMELINCSSLKKIDLSYNNLTGKVPSWFGSMMQLTMLELGFNNLVGNIPPTLGNLSSLDTLYLAGNNLEGPIIHALGRLSNLEYLSLSTNNLSGQVPNAFYNLSNLQVLDISNNKLMGPISSNLHLAFPNLSVFVVASNQFTDNFPSSLCNLTRLIEFDLSFNNFRGLIPPTWGSSNNLIYFGINYNGLIGSGKAQDLDFLSSLTNCTQLSYLILQGNNLGGVLPNLIGNFSTNLTVLDIAHNQISGSLPQEIGNLVGLGLLAMNKNSLEGTIPDSIGNLKNLVRLSLDDNNLSGNIPVAIGNLTMLSEVYMDSNNLEGSIPFTLRYCTNMQTFAAGNNNLSGSIPTQTFEYQQGLVNLDLASNSITGPIPPEFGNLKHLSKLYLFSNKLSGVIPIELGACSALIELYLDVNFFHGNIPSFLGSLRSLEFLGLSNNSFSGTIPHELENLTQLNALDLSNNQLYGKVPLGGIFSNITAISLIGNKDLCGGITQLNFPPCPKLPSNKHKSSLRKKIIVISVIGGILISFIIFVSIYCFMRKPKKLPFLPSLEHKYLRVSYGELHQATNGFSSSNLVGTGSFGSVYRGTLVHFERPVAVKVLNLQTRGASKSFMAECKALGKIKHRNLINILTCCSSVDYKGDDFKAIVFEFMPNGSLETLLHHTIEDSESTSPSLNLMQRVNIALDVAFALDYLHNDLEEAVVHCDIKPSNVLLDDDMVAHLGDFGLARLVHGVASHSSSDKGSSSVIKGTIGYVPPGKIKDLIFLFNLSW* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0948 908 SMART LRR_typ_2 516 540 IPR003591 -
Ahy17g0948 908 SMART LRR_typ_2 291 314 IPR003591 -
Ahy17g0948 908 SMART LRR_typ_2 372 395 IPR003591 -
Ahy17g0948 908 SMART LRR_typ_2 218 241 IPR003591 -
Ahy17g0948 908 SMART LRR_typ_2 98 122 IPR003591 -
Ahy17g0948 908 SMART LRR_typ_2 588 613 IPR003591 -
Ahy17g0948 908 SMART LRR_typ_2 564 587 IPR003591 -
Ahy17g0948 908 SMART LRR_typ_2 242 269 IPR003591 -
Ahy17g0948 908 SMART LRR_typ_2 419 443 IPR003591 -
Ahy17g0948 908 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Ahy17g0948 908 SMART LRR_sd22_2 419 438 - -
Ahy17g0948 908 SMART LRR_sd22_2 98 113 - -
Ahy17g0948 908 SMART LRR_sd22_2 242 265 - -
Ahy17g0948 908 SMART LRR_sd22_2 588 616 - -
Ahy17g0948 908 SMART LRR_sd22_2 218 233 - -
Ahy17g0948 908 SMART LRR_sd22_2 516 537 - -
Ahy17g0948 908 SMART LRR_sd22_2 170 196 - -
Ahy17g0948 908 SMART LRR_sd22_2 371 397 - -
Ahy17g0948 908 SUPERFAMILY Protein kinase-like (PK-like) 681 897 IPR011009 -
Ahy17g0948 908 ProSiteProfiles Protein kinase domain profile. 707 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0948 908 SMART serkin_6 707 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0948 908 ProSitePatterns Protein kinases ATP-binding region signature. 713 736 IPR017441 GO:0005524
Ahy17g0948 908 Gene3D Phosphorylase Kinase; domain 1 687 788 - -
Ahy17g0948 908 Gene3D Ribonuclease Inhibitor 163 265 IPR032675 -
Ahy17g0948 908 SUPERFAMILY L domain-like 371 627 - -
Ahy17g0948 908 Gene3D Ribonuclease Inhibitor 335 646 IPR032675 -
Ahy17g0948 908 SUPERFAMILY RNI-like 56 385 - -
Ahy17g0948 908 Pfam Leucine rich repeat 478 529 IPR001611 GO:0005515
Ahy17g0948 908 Pfam Leucine rich repeat 145 183 IPR001611 GO:0005515
Ahy17g0948 908 Pfam Leucine rich repeat 196 255 IPR001611 GO:0005515
Ahy17g0948 908 Gene3D Ribonuclease Inhibitor 6 162 IPR032675 -
Ahy17g0948 908 PANTHER LRR RECEPTOR-LIKE KINASE 13 118 - -
Ahy17g0948 908 PANTHER LRR RECEPTOR-LIKE KINASE 110 895 - -
Ahy17g0948 908 Pfam Leucine rich repeat N-terminal domain 8 46 IPR013210 -
Ahy17g0948 908 Pfam Protein kinase domain 709 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0948 908 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 13 118 - -
Ahy17g0948 908 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 110 895 - -
Ahy17g0948 908 Gene3D Ribonuclease Inhibitor 266 334 IPR032675 -
Ahy17g0948 908 Gene3D Transferase(Phosphotransferase) domain 1 789 900 - -
Ahy17g0948 908 PRINTS Leucine-rich repeat signature 149 162 - -
Ahy17g0948 908 PRINTS Leucine-rich repeat signature 242 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0948 Ahy-Chr17 11604988 11607714 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0948 5 894 Receptor kinase-like Gene Family AT3G47570 44.494 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy17g0948 Pkinase 2.20E-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0948 - - ahf:112766919 1117.45