Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0946 ATGGATATCGAAGGAGAAGCAACTTACTTTGAAAGTGACGAGGGAGGCCAAAACATGAATGAGACACTGGAGAATGTGAGTTGCACATGTGCATGTTGTGGAAGCAGTAGATATTGTGGTGTTCTAACAATAGAGGACATAAGGAACCACTCATGGATGACAGCTGATGCAGCATATGAGTGCTATGTTAGTTATGCTAAAAGTGTTGGGTTTGGAGTCCGTAAGGGAGATGCTGCTCGTGGCAAAGATGGGAATTATACAAGGCGACGGTTCTTTTGCAACAAGGCAGGATACAGAGAGGAGAAATACTACAACAATTCGAATAGGAAGAGGGAGCACAAGGCAGAGACTCGAACTGGTTGTGAGGCAAAGCTGTCCATTTACCTTGATGAAAGTTCTTCAGTTTGGAGGGTTAGGAAACTAGTCGAGGAGCATAATCATGAGTTAATACCACAATGCCTTGTCCACCTAATTCCAAATCATCGTCGTTTGACCGATGCAAACAAAGCTCAGACTGACACAATGATCATGCATGGACTCCCTACTTCTCAAATTATGGGATATCTAGTTGGACAAGCAGGTGGGTATCATAGAGTTGGCTTTTCAAAGAAAGATTTGGATAATTATATAGAAAGAAGTAGACGGGCAAGGATTATTGGTGGCGATTCAAATGCTACCATAGGATACTTGAGTGGCAAGGCTGATCTAGACCCGATGGCGATGGCACGCTATAGTTCTACCCCTGAAGATAGATTGGGCAACTTATTTTGGGCAGATGGAATGTCCAAGGCTGATTACCAGTTGTTTGGCGACGTCCTAGCATTTGATACCACGTACCGAAAGAACAAGTATAAAAAGCCACTGGTGATATTTTCTGGTAGTAATCACCATAGGCAAACTTGCATTTTTGGTTTCGCTGTGTTAGAGGATGAATCAGGACCGACTTACACATGGTTGTTGAAGAACTTTCTGGATGTTATGCTGGGTAAATCTCCTACTGTTGTGGTAACGGATGGAGATGAAGGCATGAAAGAGGGTATTGCAAATGCATTCCCTAATGCAACCCATAGATTATGCGGTTGGCACCTTCAAAAAAATGCAACGTCTAACATCAAAGATCCAACATTTTGTGCAGAATTTAAAAAGTGCATGTATGGCAAGTGGCATCCCGATGAGTTCGAGCTCCGTTGGGCTAAGATGGTAGATACTTTTGGTCTGCAAAATAATGAATGGGTTAACATTCAATATGCTAGGAAGAAAAACTGGGCTAGCTCTTACTTGATGGACAAATTTTGTGCTGAGTTTAGGACTACCTCACGATGTGAGGGCATCAACAATTATGTGAAAACTTTCATTAACTCTTGTCATTGTCTGTTGGACTTGGTGACTAATCTTGAAGGGAGGATTTGGGATTAG 1416 0.423 MDIEGEATYFESDEGGQNMNETLENVSCTCACCGSSRYCGVLTIEDIRNHSWMTADAAYECYVSYAKSVGFGVRKGDAARGKDGNYTRRRFFCNKAGYREEKYYNNSNRKREHKAETRTGCEAKLSIYLDESSSVWRVRKLVEEHNHELIPQCLVHLIPNHRRLTDANKAQTDTMIMHGLPTSQIMGYLVGQAGGYHRVGFSKKDLDNYIERSRRARIIGGDSNATIGYLSGKADLDPMAMARYSSTPEDRLGNLFWADGMSKADYQLFGDVLAFDTTYRKNKYKKPLVIFSGSNHHRQTCIFGFAVLEDESGPTYTWLLKNFLDVMLGKSPTVVVTDGDEGMKEGIANAFPNATHRLCGWHLQKNATSNIKDPTFCAEFKKCMYGKWHPDEFELRWAKMVDTFGLQNNEWVNIQYARKKNWASSYLMDKFCAEFRTTSRCEGINNYVKTFINSCHCLLDLVTNLEGRIWD* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0946 471 Pfam MULE transposase domain 272 366 IPR018289 -
Ahy17g0946 471 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 464 IPR031052 GO:0006355
Ahy17g0946 471 Pfam FAR1 DNA-binding domain 61 150 IPR004330 -
Ahy17g0946 471 PANTHER OS02G0262500 PROTEIN 47 464 - -
Ahy17g0946 471 ProSitePatterns Transposases, Mutator family, signature. 338 362 IPR001207 GO:0003677|GO:0004803|GO:0006313
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0946 Ahy-Chr17 11578151 11579566 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g0946 MULE 1.50E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0946 - - aip:107606633 995.727