Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0924 ATGAAGATTCCCGCCAACGCTACCGTCGCCGTCATCTCCGTCTTGTTCGTCTTCTCCATAATAGCGCCATCCTCGTATGCCCTTGGCTCAGGCACCACCCTCGCTGTAACTGACGCCTCCTCCGCCACCGTCTGCGGCGTTGTTGCGGCGTCACAGACCCGCCGAATCCAGTGCTACCGCCGGGGAAGTGGCGGGGCAATTATCCCCGTCTTCCCCGACGTTTCATTCTCTTCAATCTCCGGAGGCCGGAGCTACTTCTGCGGCCTCCGCTCCGGCAACTACAGCCTCCTCTGCTGGGACACCACCACCACCACCAACGCCACCACCTTCGAAAGCAAGCGACTTTACAACAATGACACTGTTCTATTCGAGAATCTCGCCGTCGGGGACTCCCAGGTTTGCGCCACGGTTGTGGGAACCGGAACGGCGACGTGTTGGAGAACCGGTAGAAGCAAAGGTTCCGACTTTTCATCTGGGTCGGACCGGTTCGCGTCCATATCATCAGGGTCGGGTTTTTCATGTGGTATTTTGAAGGAAAGTTCTCGAATTCGGTGTTGGGGAAGTAACGCTTCCGTTGCGGATTCCATAGAGAGTGAGTTTCGAAACGTTTCAATGTTGAGCATTGTGGCTGGCGGTTCACACTTGTGTGGTTTGAATTCAACTGGGTTTTTGGTGTGTAAAGGAAGTAACAGTTTTGGGCAAATTGAGGTTCCTCATCAAGGTGTTGCTTTTGAGTATTCTGGTTTGGCTCTCGGTGATTCTCATAGTTGTGCTATTAGAAGATCCAATGGTTCTGTTTTTTGTTGGGGTGACAACGGAATTTTCAATGCTAATTTCACAAAAGGTGTGTCTTTTGAGGTTATTGTTTCTGGGTCTGATTTTATCTGTGGATTAACGACAAGAAATTTCTCTGTTTTGTGTTGGGGTCCTGGTTGGTCAAATGGTTCTGATTCTGATTCTGATTCTGATGTTGTGGTTCCTTTTTTGTCTCCGATTCTTCCGGGTCCTTGTGTTCAATCTTCTTGCAGTGAGTGTGGTATCTATCCTCAATCTCAATACTTGTGTTCTGGTTTTGGTAACATTTGTAAGCCTAAGCCTTGTGGGGCTCAAGTGCCGGTGATGCCGGCTAGGCCTCCTGCGGTGGTGCCATTGCCGGCGGCGGCGCCATCTTCTCGGTCAAAGACCTTGACAACAGGGTTGTTGGCATTTGCCATAGTTGGATCAGTGGGTGCTATTGCTGGAGTTTGCACTCTGCTTTATTGCTTGTGGAATGGTGTTTGTTTAGGGAAGAAGAAAATTCATAATTCTGTTCAACCAACCATTACTAGAGGTGGCAGTTCCAATAATGGTGGGGCCGTTCAATCCAATAGCCCGCTGTCGAGATCAATGACCGTTAGGCGTCAGGGATCGAGGATAATGCGGCGGCAGAGAAGTGGAACCTCGTCAGCCAAACATCCAGACAAGGCTGAGGAGTTCACCCTGGCTGATCTTAGTGCTGCCACCAATAACTTTTCACCCGAAAACAAGATTGGGGCTGGAAGCTTTGGCATTGTGTACCGAGGAAAACTCGCTGATGGACGCGAGGTGGCGATCAAGAGAGGGGAAACAGAAACAGGTACCAAGATGAAGAAGTTTCAAGAGAAAGAGAGCGCGTTCGAGTCGGAATTAGCCTTCTTGTCACGACTACACCACAAGCATTTGGTTAGGTTAGTAGGATTCTGTGATGAAAAAGATGAAAAGCTCTTAGTTTATGAGTACATGAAGAATGGAGCATTGTATGATCATTTGCATGGCAAGAACAATGTGGATAAGAATAGTAGTGTCTTGAATTCTTGGAGAATGAGGATCAAAATCGCATTGGACGCTTCGCGAGGGATTGAGTATCTCCATAATTATGCAGTTCCTTCTATAATTCACCGAGATATCAAGTCTTCCAATATCCTTATTGATGCCACTTGGACAGCAAGAGTATCCGATTTCGGATTGTCATTGATGAGTCCGGAATCTGATATTGATTTCCGGCCAACAAAGGCAGCCGGAACAGTCGGATACATCGATCCTGAGTACTATGGTCTAAATGTATTGACAGCAAAGAGTGATGTCTATGGTCTTGGAGTGGTGCTGCTAGAACTCTTAACCGGAAAGCGAGCCATATTCAAAATCGACGAAACTTCAGGCACCCCGGTGAGCATAGTGGACTTTGCCGTGCCTGCGATCAAGGTTGGGGAATTGGCGAAAATTTTGGACCCAAGGGTTGCGCCGCCTGAGTTGAATGAAATGGAAGCTCTGGAGCTTGTGGCCTATACTGCCATGCATTGTGTGAATTTGGAGGGAAAGGATAGACCAACAATGGCTGACATTGTGGCAAATTTGGAGCGCGCTTTATCCCTTTGTGAAAGTAGTAGCCATGGCAGCATTTCCAGTGGTACAATCTCTGTTGTATCAGAATAA 2451 0.481 MKIPANATVAVISVLFVFSIIAPSSYALGSGTTLAVTDASSATVCGVVAASQTRRIQCYRRGSGGAIIPVFPDVSFSSISGGRSYFCGLRSGNYSLLCWDTTTTTNATTFESKRLYNNDTVLFENLAVGDSQVCATVVGTGTATCWRTGRSKGSDFSSGSDRFASISSGSGFSCGILKESSRIRCWGSNASVADSIESEFRNVSMLSIVAGGSHLCGLNSTGFLVCKGSNSFGQIEVPHQGVAFEYSGLALGDSHSCAIRRSNGSVFCWGDNGIFNANFTKGVSFEVIVSGSDFICGLTTRNFSVLCWGPGWSNGSDSDSDSDVVVPFLSPILPGPCVQSSCSECGIYPQSQYLCSGFGNICKPKPCGAQVPVMPARPPAVVPLPAAAPSSRSKTLTTGLLAFAIVGSVGAIAGVCTLLYCLWNGVCLGKKKIHNSVQPTITRGGSSNNGGAVQSNSPLSRSMTVRRQGSRIMRRQRSGTSSAKHPDKAEEFTLADLSAATNNFSPENKIGAGSFGIVYRGKLADGREVAIKRGETETGTKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCDEKDEKLLVYEYMKNGALYDHLHGKNNVDKNSSVLNSWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPESDIDFRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKIDETSGTPVSIVDFAVPAIKVGELAKILDPRVAPPELNEMEALELVAYTAMHCVNLEGKDRPTMADIVANLERALSLCESSSHGSISSGTISVVSE* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0924 816 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 8 811 IPR044815 GO:0004674
Ahy17g0924 816 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Ahy17g0924 816 Gene3D Transferase(Phosphotransferase) domain 1 587 806 - -
Ahy17g0924 816 SUPERFAMILY Protein kinase-like (PK-like) 484 791 IPR011009 -
Ahy17g0924 816 SMART serkin_6 504 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0924 816 ProSiteProfiles Protein kinase domain profile. 504 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0924 816 Pfam Protein kinase domain 506 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0924 816 MobiDBLite consensus disorder prediction 440 487 - -
Ahy17g0924 816 MobiDBLite consensus disorder prediction 440 467 - -
Ahy17g0924 816 Gene3D - 21 201 IPR009091 -
Ahy17g0924 816 Gene3D - 202 346 IPR009091 -
Ahy17g0924 816 Gene3D Phosphorylase Kinase; domain 1 465 586 - -
Ahy17g0924 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Ahy17g0924 816 SUPERFAMILY RCC1/BLIP-II 67 329 IPR009091 -
Ahy17g0924 816 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 8 811 - -
Ahy17g0924 816 Pfam Regulator of chromosome condensation (RCC1) repeat 250 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0924 Ahy-Chr17 11067561 11070527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0924 8 816 Receptor kinase-like Gene Family AT3G55950 58.604 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Ahy17g0924 Pkinase 1.20E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0924 - - adu:107457637 1427.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0924 17 11067561 11070527 Ahy20g1405 20 33693731 33696681 ECH
Ahy17g0924 17 11067561 11070527 Ahy17g0924 17 11067561 11070527 ECH
Ahy17g0924 17 11067561 11070527 Ahy7g0744 7 8808363 8811318 hybridization
Ahy20g1405 20 33693731 33696681 Ahy17g0924 17 11067561 11070527 PCT
Ahy10g1035 10 23487433 23490438 Ahy17g0924 17 11067561 11070527 PCT
Ahy17g0924 17 11067561 11070527 Ahy20g1405 20 33693731 33696681 PCT
Ahy17g0924 17 11067561 11070527 Ahy10g1035 10 23487433 23490438 PCT