Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0916 ATGGACCAAGCAATTTCTGAAGAAGCATCGTATGACACTGCATATGATGATAGTGATCAGTATAATTCTTGCGACGTTAATGTTCCATCGCTTAGTGAAGATGACACACAACATGTGGACAAGGGGAAAGAATCTGTAAACGTTATTCAAGTAGAGGATGATGCAATGACAGTGAATCCTGAGTTACCCGATCACACTGGAATTCCAATAGATGAAATTCCGTACGTAGGATTGAGATTTGTTTCCTTGCAGCGGGCACAAGAGTTTTATTCTAATTATGCAAAGAAAGTTGACTTCGTGACTAGGATTAGGAATACCAACTTTGATAAGACCAGGAAGGATTCAAAGATACCCATTAACCAATCATTACACTGTAGTCGTGAAGGTTATCGGGAGTCTCGAGTGAAGGCAGCAACTCGGGTAAAGAGAATAACAACAGCCAGATGCAAAGCAAGGATGTACGTGATGCTTGATAGGCAGAAGGATAATTGGATGGTCTCCAAACTAGAACTGAAGCACACCCACCCGTGTTCTGCCAAACAAGCTGTGCATTACACTGAGTAA 564 0.4167 MDQAISEEASYDTAYDDSDQYNSCDVNVPSLSEDDTQHVDKGKESVNVIQVEDDAMTVNPELPDHTGIPIDEIPYVGLRFVSLQRAQEFYSNYAKKVDFVTRIRNTNFDKTRKDSKIPINQSLHCSREGYRESRVKAATRVKRITTARCKARMYVMLDRQKDNWMVSKLELKHTHPCSAKQAVHYTE* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0916 187 Pfam FAR1 DNA-binding domain 88 177 IPR004330 -
Ahy17g0916 187 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 178 - -
Ahy17g0916 187 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0916 Ahy-Chr17 10833888 10834936 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g0916 FAR1 8.50E-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0916 - - aip:107606659 382.874