Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0905 ATGGAAAACTACTACTATTCTGGATGGCCTCAATCTCAATGCAACAACTCTGCACCAAACAGTAACAATAATCCTTCCTTTTCAGTACCAACACAGATAGTGCCTCATGCCTATGACTCAGCCTTTGCCTCTCTTCAATTCCAATATCCATGGCCTTTAGCCTTTGAAGGGTTTCCAGAAGATAGAGCTGCAAGTGCTTCTAAGAGCCATAGCCAAGCAGAGAAAAGAAGAAGGGACAGGATCAATGCACAGCTTGCAACTCTTAGAAAACTGATTCCTAAGTCTGATAAGATGGACAAGGCTGCATTACTAGGGAGTGTAGTAGATCATGTGAAGGATCTAAAGCGAAAAGCGATGGATGTGAGCAAAAGCATCACAGTTCCAAGTGAAACTGATGAAGTAACAATAATAGAGTGTGACCCTGATCAAGATGAAAGCTATGCTAAAGTGAAGATACTGAAGCACAACATTGTAATTTCAGTTTGCTGTGATGATAGACCAGAACTTTTCAGTGAACTCATTCAAGTCCTAAAAGGGTTGAGTCTCACAGCAGTTAAAGCTGACATAGCAAGTGTTGGTGGCAGAATCAAGAGCATATTGGTGCTATGCTCTAAGGAAAATGAAGAAGGTGGTGATGGTGTTTGCCTTAACACTCTCAAACAATCACTGAAATCTGCTGTTAACAAAATTGCTTCATCATCCATGACATCAAATTGTCCCACAAGAAGTAAGAGGCAAAGGTTCTTCTTGCCTTCACATTTCATACAGTGA 771 0.4086 MENYYYSGWPQSQCNNSAPNSNNNPSFSVPTQIVPHAYDSAFASLQFQYPWPLAFEGFPEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVVDHVKDLKRKAMDVSKSITVPSETDEVTIIECDPDQDESYAKVKILKHNIVISVCCDDRPELFSELIQVLKGLSLTAVKADIASVGGRIKSILVLCSKENEEGGDGVCLNTLKQSLKSAVNKIASSSMTSNCPTRSKRQRFFLPSHFIQ* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0905 256 PANTHER TRANSCRIPTION FACTOR BHLH30 40 254 IPR045847 GO:0003700|GO:0006355
Ahy17g0905 256 Pfam Helix-loop-helix DNA-binding domain 68 114 IPR011598 GO:0046983
Ahy17g0905 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 118 IPR036638 GO:0046983
Ahy17g0905 256 SMART finulus 71 120 IPR011598 GO:0046983
Ahy17g0905 256 PANTHER TRANSCRIPTION FACTOR BHLH51 40 254 - -
Ahy17g0905 256 CDD ACT_UUR-ACR-like 158 195 - -
Ahy17g0905 256 CDD bHLH_AtAIG1_like 60 137 - -
Ahy17g0905 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 114 IPR011598 GO:0046983
Ahy17g0905 256 Gene3D - 60 123 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0905 Ahy-Chr17 10595145 10596977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0905 54 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 46.262 4.17e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy17g0905 HLH 7.90E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0905 - - gmx:100799687 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0905 17 10595145 10596977 Ahy17g0905 17 10595145 10596977 ECH
Ahy17g0905 17 10595145 10596977 Ahy7g0729 7 8402921 8404805 hybridization
Ahy20g1384 20 31311200 31312453 Ahy17g0905 17 10595145 10596977 PCT
Ahy17g0905 17 10595145 10596977 Ahy20g1384 20 31311200 31312453 PCT