Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0902 ATGATGATCGAAGACAACAACAAATTTGACGAAGAAGCAGATCGAATCAAGGGGTCATGGACTCCCCAAGAGGATGCAACGCTTCTGAAGCTGGTGGCGCAGCACGGAGCACGGAACTGGTCCGTCATAAGCAACGGGATACCGGGCCGATCGGGAAAGTCATGCCGACTGCGGTGGTGCAACCAGCTCAGCCCCGACGTTCAGCACCGACCGTTCACCCCTGCGGAGGACGAAATCATCCTTAAGGCTCACGCCGTACACGGCAACAAGTGGGCCACCATCTCCAGACTCCTTCCTGGCCGCACCGACAACGCTATCAAGAACCACTGGAACTCCACCCTCCGCCGCCGTAAAGGTGTCACCGTCGCCTTTCCCGGCGCCGGATTCCCCTCCGCGGCAGCAACCGACGCCTCCGCCAGCGGAGGATTATCCGGATTCTCTTCTGCCGCCACGTCGTCGTCATCAGATTTCAGTCCAACATTTGTTTGCCAAAAGCGCAAGGGCGAGCAGTTAGAGTTGCCACAGAATGTCAACAAGAAGCCGTGTTTGGCGGCAGTTGCCGTCAACAGTCACGCGGAGGAGGAGGTTCGCCAAAAGCGCAACGCTGAAGAAGAAGAAGAAGGCGGCGTGACGACACTGAGTTTGCTCCCGCCCGGAGAGAAGCCTTTGGGCGCAGAGGGAGTGTGGCGGAAGGAGGAGGAAGTCAATCGGTACGGCGAGCATGCATGGTTGATGAAGATGATGCGGCCCATGATAGCAGAAGAGGTTAGGAGATACATTCAAAGCTTACAAAAGACTCAACCACTCTTTGAGCCTGATCCACCTAGTAAAAATTTTTAA 840 0.5595 MMIEDNNKFDEEADRIKGSWTPQEDATLLKLVAQHGARNWSVISNGIPGRSGKSCRLRWCNQLSPDVQHRPFTPAEDEIILKAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRRKGVTVAFPGAGFPSAAATDASASGGLSGFSSAATSSSSDFSPTFVCQKRKGEQLELPQNVNKKPCLAAVAVNSHAEEEVRQKRNAEEEEEGGVTTLSLLPPGEKPLGAEGVWRKEEEVNRYGEHAWLMKMMRPMIAEEVRRYIQSLQKTQPLFEPDPPSKNF* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0902 279 Pfam Myb-like DNA-binding domain 17 63 IPR001005 -
Ahy17g0902 279 Pfam Myb-like DNA-binding domain 71 113 IPR001005 -
Ahy17g0902 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 63 IPR017930 -
Ahy17g0902 279 PANTHER OS01G0850400 PROTEIN 10 201 - -
Ahy17g0902 279 Gene3D - 71 117 - -
Ahy17g0902 279 MobiDBLite consensus disorder prediction 193 226 - -
Ahy17g0902 279 CDD SANT 19 61 IPR001005 -
Ahy17g0902 279 MobiDBLite consensus disorder prediction 137 159 - -
Ahy17g0902 279 CDD SANT 71 114 IPR001005 -
Ahy17g0902 279 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Ahy17g0902 279 SMART sant 16 65 IPR001005 -
Ahy17g0902 279 SMART sant 68 116 IPR001005 -
Ahy17g0902 279 PANTHER MYB PROTEIN-RELATED 10 201 - -
Ahy17g0902 279 ProSiteProfiles Myb-like domain profile. 12 63 IPR001005 -
Ahy17g0902 279 MobiDBLite consensus disorder prediction 133 159 - -
Ahy17g0902 279 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Ahy17g0902 279 MobiDBLite consensus disorder prediction 193 207 - -
Ahy17g0902 279 Gene3D - 16 68 - -
Ahy17g0902 279 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0902 Ahy-Chr17 10585523 10587967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0902 14 158 MYB Transcription Factor Family AT4G37260 57.325 3.10e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy17g0902 Myb_DNA-binding 6.40E-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0902 - - ahf:112702359 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0902 17 10585523 10587967 Ahy7g0726 7 8377575 8379966 hybridization