Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0897 ATGGAAATTTCTAACCCTAACGATCCCCAAGAAACCAAACCCACCGCCACCACCGCCCCTATCCCCACTCTTTCTCAAACACCTAACACCAGCAGCAGCAGCAGTGATAATAATAACCCCCCTCACAATAATAACCGCAAGTGCAAGGGAAAAGGTGGACCTGACAACAACAAGTTTCGTTACCGCGGCGTCAGGCAGCGGAGCTGGGGGAAATGGGTGGCGGAGATAAGAGAACCGCGCAAGCGGACCAGGAAGTGGCTCGGAACATTCGCCACCGCCGAAGATGCCGCCAGGGCCTATGACCGTGCTGCTTTGATCCTCTACGGTTCTAGGGCACAGTTGAATCTGCAACCCTCAGTTTCCGTCAATTCTAACTCTTCTAATTCTTCGTCTCGTGGCGGTTCTTCTTCTTCTTCTTCTTCCTCCACTCAAACGCTTAGGCCTTTGCTTCCTCGCCCTTCCGGGTTCACCTTCTCATCCGGTTCCCGGTTTCCCGTTGTGTTTAACGGCCTCCACAATAACAATAATAATAATAACTTCTCTGCTGCTACCGCCTCGGGTTTCGTGCCATTTGGGGTTTTCCCTTTTAGTAACGGTAATAATAACAGTGTTGTTGCACCACCACCGGTGCAGTTTCATCATCAGTATTCACCACAAGTGCTGCAAATTCAGCAGCAGCAGCAGCTTCAGCAGCAACAACAACAGTGTCACCATCGTCACCAAAAAGCCGATGAATCAGGTGGAACAACTTCAATTAGGTTAACCTCGCATCAGAATAATAATAATAATACTACTAATCATCCTTCGGGTTATGTTCATCGTCCTCATCAAGAGAGTTGCATGGTTATGGAAGAAGAAGTATTGAATTATAGTAATAATAATAACAATCTCGCTGTGGATTCAACATTGTCTTCCTCAGAGGTTGGAGCAGATGCAGTGGTGGATCCAGATCCGGATCCGGAACCGGGTATCGGATCTATGTGGTCTTCGTTGACGGAGGAGGATTATCCAGTTAGCTTGTGGGATTACAATTACAATGATCCATACTTTTGTTTGAATTTTGAAGAAATTTGA 1074 0.4702 MEISNPNDPQETKPTATTAPIPTLSQTPNTSSSSSDNNNPPHNNNRKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAALILYGSRAQLNLQPSVSVNSNSSNSSSRGGSSSSSSSSTQTLRPLLPRPSGFTFSSGSRFPVVFNGLHNNNNNNNFSAATASGFVPFGVFPFSNGNNNSVVAPPPVQFHHQYSPQVLQIQQQQQLQQQQQQCHHRHQKADESGGTTSIRLTSHQNNNNNTTNHPSGYVHRPHQESCMVMEEEVLNYSNNNNNLAVDSTLSSSEVGADAVVDPDPDPEPGIGSMWSSLTEEDYPVSLWDYNYNDPYFCLNFEEI* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0897 357 CDD AP2 60 117 IPR001471 GO:0003700|GO:0006355
Ahy17g0897 357 MobiDBLite consensus disorder prediction 119 154 - -
Ahy17g0897 357 SMART rav1_2 60 123 IPR001471 GO:0003700|GO:0006355
Ahy17g0897 357 Pfam AP2 domain 60 109 IPR001471 GO:0003700|GO:0006355
Ahy17g0897 357 MobiDBLite consensus disorder prediction 232 274 - -
Ahy17g0897 357 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Ahy17g0897 357 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Ahy17g0897 357 MobiDBLite consensus disorder prediction 1 45 - -
Ahy17g0897 357 MobiDBLite consensus disorder prediction 48 62 - -
Ahy17g0897 357 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 10 351 - -
Ahy17g0897 357 MobiDBLite consensus disorder prediction 1 63 - -
Ahy17g0897 357 SUPERFAMILY DNA-binding domain 60 118 IPR016177 GO:0003677
Ahy17g0897 357 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABI4 10 351 - -
Ahy17g0897 357 MobiDBLite consensus disorder prediction 247 272 - -
Ahy17g0897 357 ProSiteProfiles AP2/ERF domain profile. 60 117 IPR001471 GO:0003700|GO:0006355
Ahy17g0897 357 Gene3D AP2/ERF domain 59 117 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0897 Ahy-Chr17 10467400 10469067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0897 46 195 AP2-EREBP Transcription Factor Family AT2G40220 67.742 1.68e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy17g0897 AP2 7.80E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0897 K09286 - gmx:100301892 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0897 17 10467400 10469067 Ahy17g0897 17 10467400 10469067 ECH
Ahy17g0897 17 10467400 10469067 Ahy7g0720 7 8231560 8232651 hybridization