Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0893 ATGACACATCCACATACATTTCTTGTTATGAAAAAATCAGGAGGAGGCATCATGAAGGGTTACGAGCCACGTTCAAGTTCGTCTTGTGCGGCCTGCAAATTCTTGAAGAGAAGGTGCATACCTAACTGCATATTCGCCCCTTACTTTCGCTCCGACGAGTGCAAGAAATTCGCCAAAGTTCACAAGGTCTTCGGCGCCAGCAATGTCAGCAAGATCCTCGTCGAGGTCCCCGAGGACCAGCGGGAAGACACCGTCAACTCCCTCGCCTACGAGGCCGAGGCCCGCCTCCGCGACCCTGTTTACGGCTGCATTGGCGCCATTGCTCTCCTTCAGAGGAAAATGCTCGAGCTTCAGCACGATCTCGCCATTGCCAAGGATCGTCTTGCTCGCTATTCTGCTGTTGCTGCTACTGCTGATGCTACTTCTCTTATTACTTCTTCCTCTTCTTCCTCCGATAACATCTTTCATTTCAATAATTCTCAAGTTTCCTTGCCTCCTTTCCCTGAATTCCCTTCTTCCTCTGATTTCAATGACACTGCTGCTTTCTGCCACGCCTCTTCTTCTTCCTCTCAATCCTTTCCCAGACACGACACCACTGTAGTCGACGATTTCATTCAAATTCCATATATATTTTAG 636 0.489 MTHPHTFLVMKKSGGGIMKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEDQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMLELQHDLAIAKDRLARYSAVAATADATSLITSSSSSSDNIFHFNNSQVSLPPFPEFPSSSDFNDTAAFCHASSSSSQSFPRHDTTVVDDFIQIPYIF* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0893 211 ProSiteProfiles LOB domain profile. 27 128 IPR004883 -
Ahy17g0893 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 18 180 - -
Ahy17g0893 211 Pfam Lateral organ boundaries (LOB) domain 28 125 IPR004883 -
Ahy17g0893 211 Coils Coil 107 127 - -
Ahy17g0893 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 18 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0893 Ahy-Chr17 10369825 10370549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0893 18 182 AS2 family AT3G11090 61.212 3.84e-65 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy17g0893 LOB 1.50E-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0893 17 10369825 10370549 Ahy17g0893 17 10369825 10370549 ECH
Ahy17g0893 17 10369825 10370549 Ahy7g0717 7 8156160 8157108 hybridization