Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0887 ATGAGCAAGAGCTTGAAACTAAGATGGTTCATGGATTTTAATGGAGTTTTGAGGTTTGCCGTGGTGGTGTGTTTGTTACTTCAAAACTTTGGCTTGTGCTACACTTTGAATGAAGAAGGTAAAGCTCTTTTGAAGTTGAGGGAGAGAATAGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGTATGATGATGAAGCAGTTTTTGACCCTTGTAATTGGTTTGGTGTTGAGTGTTCAGATGGAAGAGTAGTGGCCTTGAATCTGAAAGATCTTTGCCTTGGAGGAACTCTTGCACCTGAGTTAGTCAACCTTGTTCACATAAAGTCCATTATTTTTAGGAACAACTCGCTCTCCGGCATCATCCCCAAAGAAATTGAAGAGTTGAAAGAGTTGGAGGTTTTGGATTTGGGATACAACAACTTGAGTGGACATATACCTATTGGTCTTGGGAGTAATATCTCATTGTCAATCCTTTTGTTGGACAACAATGAGTTTCTTGTGAGTTTCACCCCCGAAATCGATGAACTGAAGATGCTTTCAGAAAGTCAAGTAGATAAAAAGCAGCTAGTTGATGCAGCTAAAAGGCCTGCTTGTACAACAAGATCCTTCTCATGGCATGTAAATGTTGATCAAAACACTGGTATCAGGAGTCTACTGCAAAGTCCTAAATCGAAACACTTTCATGCCGGGGAAGATAGCTATAATCGTGTATATAATCAACCACTTAGTAGCCCTGCTTCATCACCAGATTCCCCTAGACAAAATGCTTCTAATCCTCCTCCTTCCAAGTCTAAAGTAGCATCTAGAAGTTCCAATTTGAAAAATCATCGAGTTCCAGTTGAGATTGGAGTCATAGGTGGTGCTGCATTGCTTCTTATTACATGCATTGGAATATTTCTCTGCAAGATCAACAAGGTGACTAATGTTAGACCTTGGGCTACAGGACTAAGTGGACAGCTTCAGAAGGCATTCGTAACCGGTGTGCCAAAGCTAAAGAGAACAGAGATTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCACCCATTGGCACAATGTATAAAGGGACTTTGTCTAGTGGTGTTGAAATTGCCGTAGCTTCTGTTTCGGTAACATCATCAAAGGATTGGTCAAGGAATTTAGAAGCACAGTTTAGAAACAAGATAGACATGTTATCCAAAGTGAACCACAGGAATTTTGTCAATCTGATTGGCTATTGTGATGAAGAGGAGCCTTTCACCAGAATGATGGTTTTCGAATACGCCCCAAATGGAACACTATTTGAGCATTTACACATAAGAGAAGCTGAGCGCTTGGACTGGGAAACAAGACTTCGAATCGCGACCGGGACAGCTTACTGCCTACAACATTTGCACCAGTTGGAACCTTCTATGACTCTTACCAACCTGAATTCTTCAGTTATCCATCTAACCGAGGACAATGCTGCGAAAATCTCAGACTTTAGTTTCTCATATGAAACAGCTTCAGCTGAGACAAAGTCTTGGGGCAAAAGACACATTGACATGGCACCAGCAACACTTGAGAGCAATGTTCATAGCTTTGGTACCATGCTATTAGAAATGGTAACAGGAAAGCCTTGTTATTCTGTGGATAGTATTAATGGCTTGATTGAGAATTGGGCAACACACTATCTTGAAGGTGACAAAGCACTCAAAGAAGTGGTGGATCCAACACTAGCATCTTACCAAGAGGATCAGCTAGAACAAGTTGCTGCATTGATCAAATGTTGTTGCAACTCTGAATCAGAGAAGAGACCAACAATGAAACAAGTGAGTGTGAGGTTGAGACAGATAACAAAACTAGCACCTGAAGCTGCAGTTCCAAGGCTTTCTCCACTTTGGTGGGCTGAACTTGAGATTTCTAATGCAGATGCAATATGA 1908 0.4104 MSKSLKLRWFMDFNGVLRFAVVVCLLLQNFGLCYTLNEEGKALLKLRERIVSDPFGALSNWYDDEAVFDPCNWFGVECSDGRVVALNLKDLCLGGTLAPELVNLVHIKSIIFRNNSLSGIIPKEIEELKELEVLDLGYNNLSGHIPIGLGSNISLSILLLDNNEFLVSFTPEIDELKMLSESQVDKKQLVDAAKRPACTTRSFSWHVNVDQNTGIRSLLQSPKSKHFHAGEDSYNRVYNQPLSSPASSPDSPRQNASNPPPSKSKVASRSSNLKNHRVPVEIGVIGGAALLLITCIGIFLCKINKVTNVRPWATGLSGQLQKAFVTGVPKLKRTEIEAACEDFSNVIGTSPIGTMYKGTLSSGVEIAVASVSVTSSKDWSRNLEAQFRNKIDMLSKVNHRNFVNLIGYCDEEEPFTRMMVFEYAPNGTLFEHLHIREAERLDWETRLRIATGTAYCLQHLHQLEPSMTLTNLNSSVIHLTEDNAAKISDFSFSYETASAETKSWGKRHIDMAPATLESNVHSFGTMLLEMVTGKPCYSVDSINGLIENWATHYLEGDKALKEVVDPTLASYQEDQLEQVAALIKCCCNSESEKRPTMKQVSVRLRQITKLAPEAAVPRLSPLWWAELEISNADAI* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0887 635 Gene3D Ribonuclease Inhibitor 35 226 IPR032675 -
Ahy17g0887 635 PANTHER PROTEIN MALE DISCOVERER 2 1 632 - -
Ahy17g0887 635 MobiDBLite consensus disorder prediction 238 272 - -
Ahy17g0887 635 SUPERFAMILY Protein kinase-like (PK-like) 325 604 IPR011009 -
Ahy17g0887 635 Gene3D Phosphorylase Kinase; domain 1 314 423 - -
Ahy17g0887 635 Pfam Leucine rich repeat N-terminal domain 37 79 IPR013210 -
Ahy17g0887 635 SUPERFAMILY L domain-like 38 180 - -
Ahy17g0887 635 ProSiteProfiles Protein kinase domain profile. 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0887 635 Pfam Protein tyrosine and serine/threonine kinase 344 603 IPR001245 GO:0004672|GO:0006468
Ahy17g0887 635 Gene3D Transferase(Phosphotransferase) domain 1 424 615 - -
Ahy17g0887 635 PANTHER LRR RECEPTOR-LIKE KINASE 1 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0887 Ahy-Chr17 10311928 10315710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0887 13 611 Receptor kinase-like Gene Family AT5G16000 25.160 2.97e-48 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Ahy17g0887 PK_Tyr_Ser-Thr 1.30E-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0887 - - adu:107496969 1186.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0887 17 10311928 10315710 Ahy17g0887 17 10311928 10315710 ECH
Ahy17g0887 17 10311928 10315710 Ahy7g0710 7 8096769 8100207 hybridization
Ahy20g1364 20 30128171 30132169 Ahy17g0887 17 10311928 10315710 PCT
Ahy17g0887 17 10311928 10315710 Ahy20g1364 20 30128171 30132169 PCT