Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0878 ATGGCATTGGAGAATCGTCCTTTGATCATAAAGCTTAAAATTTCTTCCAAACGAAAGCTTGACGTAAATGAAAGCGTCGAGAAAGAAGTTTCAGTGCAGAAAGAACCAGTTACTCCTGTTCAAGAGGTCTCAACTCAGTTTCACAAAGAAATATCCTGCGATGGTGCTACTGAATGTCCTGATGCCATTGAAGAATATGCACAGGCAGCTAAAAGAGCTTGCCCGGAAAAAGCACGAAAACATCTTGCGTATCTTGGATGGGAAATTGAGTGGACAAAGTATAAAGCAAGCAACACTTGCTATAGGTACAGATATAGGTCGCCTGATAAACAGGGTGTTTACTACTCTCTCAGTCGGGTTTGTAAGTATGTGGCACAGAACTCGGACATGAACCCTTTGCCGTCCCAAAATGATCAGAGTATGATGCAACTTACAGCTGACAATCATCTTGCACCTATTTGTATTGATCAATCAGAAAACAGTCATGATCTAAATATTTTGCCACCAGTTGTGTCGTCTCCTGTGGATGAAGTTGCAGATGAACCTGAGTTTTGTCCTCAAGCTGTTTTAGAATATAGCTTGAATAGATCTGCAATGCGAGGGCCTGACATGAAAGTGGGTAGGTCCAAAGCAAAGAGGCATCTATTGGCTGAAGGATGGAGCTATCACTATGCAAACCCAAGAAATAAAAGACAAGGGTTTGTGTATATCCCTCCAGACAAGGGAAGAAATCTCACAACACTCCATGCAGCTTGCCATTATTGTATTAAACAAAATGTTGCTAAATGGACCAAGCTCGGAATGCAACCTTTGAATGCACAGGATAATGTTGACCAGGTTTGGAGTGCCAATTTATTGCAGAAAGCGTCCCAATGGCTTCGAGAGGAATGCATGGTACCTCCCACAGAAGTCATAACTTCAAGTGGATCAAACCATAGTCGGAAGCGGAAACTCTTGAACAATACAAAGCCCAGCTTATCTAAGCACCAAAGAAATGGATTACCTCGACGCGTGCTGCGATCAAATAAAAGGGTGCAAAAGGTGTCTACCCCTTCTTTGTCACACCAGAAACCTCAGAATATACTCTCTTGGTTGATAGACAACAACATTCTGTTGCCAAGGTCTAAGGTTTCTTACAAGCCAAAAGGCGGGCTCTGTTCAGCTGAAGGGAGAATAACCAGAGATGGAATCAAGTGTAATTGTTGTTTGAAAGTATATAGTCTTGCTGGCTTTGAAAGTCATGCTAGTGGCTGTAGTACACGCAGACCGGCTGCAAGTATTATTTTAGAAGATGGTAGATCACTATTAGATTGCCTGATAAAAACGGTGGAAGATCATATGACAAGGGAAGCTATGGCAAAACCACCAAAATATTTTCCTACAGGCGAGAATGACAATATTTGTTCTGTTTGCCACTATGGTGGGAATCTAATTTTATGCGATCAATGTCCATCTTCATTTCATGTGACATGTCTAGGTGTGGAGAAAGTTCCTGATGGTGACTGGTTTTGCCCATCATGTCGATGTGCAATTTGTGGCAAAAGTAAGATAGAAGAAAAGGAGGGAGATTTCCTTGTTTGCATTCAGTGTGAACATAAATATCACTTTAAGTGCCTCAGAACTAAATATGCAACTAACTCGAGAAACTGGTTCTGCGGAAGGGACTGTGAAAAGATATATTTTGGTCTCCATAAGCTACTAGGAGAGCCAGTTTCAGTGGGCACTAACAATCTAACTTGGACATTGGTGAAATATATAAACTCCGAGAGTAGTGATCCATGTACTACTAAAGGTTACTTATTGCCAGAAAGTTACAGCAAACTCAATGTTGCACTCAGAGTGATGCATGAATGTTTTGAGCCCCTAAAGGAACCTTCGTCTACCAGAGATCTCATGGAAGATGTTTTATTCAGTCAATGGTCAACACTTAATCGATTGAATTTCTATGGTTTCTATACCGTACTTCTGGAGAGAAATGAAGAACTGATAAGTGCAGCAACTGTTAGGGTTTATGGAAAGAAGGTAGCAGAATTGCCTCTTATTGGTACCAGATTACAGTATCGTCGACATGGAATGTGCCGCATTTTGATGAATGAGCTTGAAAAGAGGCTCATGCAGTTGGGAGTGGAGAGGCTGGTTTTGCCTGCTGTTCCTAGTGTTGTAGACACATGGACTGGTTCTTTTGGCTTTGTAAAGATGACAGAGTTCGAGAGGTCGCAATTCTTGGACAATACTTTTTTAGATTTTCAGGGTACCATCATGTGCCAGAAGCTGCTGAAGATTCCATCTCCAGAATCGGTTTTGTTAATAGAGTCCCAACAAAGGACACAGCATGTTTTGCCTGGAAACAAGTTAAATTTTGACGGTGATCTGATATCTGAAGTATTACACCAAGCAGAAGAAACTGACAAACGAGAGAGAGAGAATTCACAAATCCACAATAATTGTGCTGGAAACAATGATCATTGCAGTAATGGTGCCATTGACATTGAGCAAGTCACACCGGTGAATAAACCAAGTCTTGAGGATCAACAGTGGCAGAATGATCCACAGAGCTCTATTGTAACACAAGCTGACAGTAATAATGGCTCACCATATAAGTGCTACTACAAAAGAAGGAAATACACAAAGTTTTAG 2637 0.4118 MALENRPLIIKLKISSKRKLDVNESVEKEVSVQKEPVTPVQEVSTQFHKEISCDGATECPDAIEEYAQAAKRACPEKARKHLAYLGWEIEWTKYKASNTCYRYRYRSPDKQGVYYSLSRVCKYVAQNSDMNPLPSQNDQSMMQLTADNHLAPICIDQSENSHDLNILPPVVSSPVDEVADEPEFCPQAVLEYSLNRSAMRGPDMKVGRSKAKRHLLAEGWSYHYANPRNKRQGFVYIPPDKGRNLTTLHAACHYCIKQNVAKWTKLGMQPLNAQDNVDQVWSANLLQKASQWLREECMVPPTEVITSSGSNHSRKRKLLNNTKPSLSKHQRNGLPRRVLRSNKRVQKVSTPSLSHQKPQNILSWLIDNNILLPRSKVSYKPKGGLCSAEGRITRDGIKCNCCLKVYSLAGFESHASGCSTRRPAASIILEDGRSLLDCLIKTVEDHMTREAMAKPPKYFPTGENDNICSVCHYGGNLILCDQCPSSFHVTCLGVEKVPDGDWFCPSCRCAICGKSKIEEKEGDFLVCIQCEHKYHFKCLRTKYATNSRNWFCGRDCEKIYFGLHKLLGEPVSVGTNNLTWTLVKYINSESSDPCTTKGYLLPESYSKLNVALRVMHECFEPLKEPSSTRDLMEDVLFSQWSTLNRLNFYGFYTVLLERNEELISAATVRVYGKKVAELPLIGTRLQYRRHGMCRILMNELEKRLMQLGVERLVLPAVPSVVDTWTGSFGFVKMTEFERSQFLDNTFLDFQGTIMCQKLLKIPSPESVLLIESQQRTQHVLPGNKLNFDGDLISEVLHQAEETDKRERENSQIHNNCAGNNDHCSNGAIDIEQVTPVNKPSLEDQQWQNDPQSSIVTQADSNNGSPYKCYYKRRKYTKF* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0878 878 SMART ring_2 468 507 IPR001841 -
Ahy17g0878 878 SMART ring_2 509 559 IPR001841 -
Ahy17g0878 878 Gene3D - 607 741 - -
Ahy17g0878 878 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 73 812 - -
Ahy17g0878 878 SMART PHD_3 467 508 IPR001965 -
Ahy17g0878 878 SMART PHD_3 509 557 IPR001965 -
Ahy17g0878 878 SUPERFAMILY FYVE/PHD zinc finger 443 508 IPR011011 -
Ahy17g0878 878 PANTHER PHD ZINC FINGER PROTEIN 73 812 - -
Ahy17g0878 878 SUPERFAMILY FYVE/PHD zinc finger 509 564 IPR011011 -
Ahy17g0878 878 MobiDBLite consensus disorder prediction 303 334 - -
Ahy17g0878 878 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 510 559 IPR013083 -
Ahy17g0878 878 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 460 509 IPR013083 -
Ahy17g0878 878 CDD NAT_SF 654 714 - -
Ahy17g0878 878 ProSiteProfiles Zinc finger PHD-type profile. 465 510 IPR019787 -
Ahy17g0878 878 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 610 759 IPR000182 GO:0016407
Ahy17g0878 878 Pfam Tify domain binding domain 390 441 IPR032308 -
Ahy17g0878 878 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 612 740 IPR016181 -
Ahy17g0878 878 MobiDBLite consensus disorder prediction 840 860 - -
Ahy17g0878 878 Pfam PHD-finger 467 509 IPR019787 -
Ahy17g0878 878 Pfam Acetyltransferase (GNAT) family 631 717 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0878 Ahy-Chr17 10166017 10173900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0878 337 702 PHD Transcription Factor Family AT5G58610 52.356 5.39e-122 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy17g0878 Acetyltransf_1 0.00025 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0878 - - ahf:112762747 1776.91