Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0859 ATGGACACTACTAGAGAGAACAACAACAACAATCAAGTTATTTATCAACTTGGGATGAGAAATGTAGCACATTGGCACCATCTAAAGTGGTTGTTATTCCTGATTCTGCTGCTGCCATTGAAGCCAGTTTTGTGTGATGACCATTGGGATGGAGTGGTTGTCACACAATCAAACTTCTTAGCCCTTCAAGCATTCAAGCAAGAACTCATTGACCCAAAAGGCTTCTTGAAAAGCTGGAATGACAGTGGCTATGGAGCTTGTTCAGGTGGTTGGGCTGGAATCAAGTGTGCTCAAGGACAAGTCATTGTGATCCAGCTTCCATGGAAGGGTTTGAAGGGACACATCACTCAGAAAATTTCCCAACTTCAAGGCCTCAGAAAACTAAGTCTTCATGACAACCAAATTGGTGGTTCAATCCCTTCATCATTGGGGCTTCTTCCCAATCTAAGAGGTGTTCAACTCTTCAACAACAAGCTAACTGGTTCTGTTCCTCCTTCATTAGGTTCTTGTCCTTTGCTTCAATCTTTAGACCTCAGCAACAATTTACTCACTGGTCAAATCCCTTATACTCTTGGCAATTTAACCAAGCTTTATTGGCTCAACTTGAGCTTCAATTCCTTCAATGGTTCAATACCATCTAGCTTAACTAGTTTACCTTCTTTGACTTTCCTTTCTCTTCAACATAATAATCTCTCAGGTTCAATTCCTAACTCATGGGGTGGTAAAAATGGTTTCTTTAAGCTCCAGAATTTGATCTTAGATCACAACTTCTTGAGTGGAACCATTCCTTCTTTGGGAAGCCTAGTTGAACTCAGAGAGGTTTCTCTTGGTAATAACAATTTTAGTGGAGAAATACCATTTGAAATTGGAAAACTTTCTAGGCTCAAGACATTAGATTTTTCTAACAATGCATTCAATGGAAGCTTGCCTGCTACTATATCAAATTTATCCTCACTCACTCTGTTGAATGTAGAGAACAACCACTTTACTAGTCAAATCCCAGAAGCTTTAGGAAGATTACACAATCTTTCTGTTCTGGTGTTGAGTAGAAACCAATTTGTTGGCCACATTCCTCATAGTATTGGAAATATTTCAACACTTACGCGACTTGATTTGTCGCTGAATAACATCAGTGGCGAAATTCCAGATTCCTTTGCGAATCTAGCTAGTCTTAATTCCTTCAATGTTTCTTACAACAATCTATCTGGTCCTGTTCCCACATTACTTGCCAACAAATTTAACTCAAGCTCATTTGTGGGAAATATTCAATTATGTGGCTATAGCCCTTCAAATCCATGTCCTTCACAAGCTCCTTCACAAGGAGTCATAGTCCCAACTCCTGAATCATCTAAACAACATCATCATAAGAAACTAGGCATCAAAGACATAATTCTTATAGTGGCAGGGGTGCTCCTTGTAGTCCTGGTAACAATTTGCTGCATCCTGCTAGTCTGCCTTATCAGAAAAAGATCAACATCGGATGCGGAACAAGACCGGGCTGCAACGAGAGCTACCACAACAAGGACAGGGAAGGGAATCTCTCCTCCAGCTGGAGCCGGTGATGTCGAAACTGGTGGTGAGAATGGAGGGAAACTAGTCCATTTCGATGGACCATTGGCTTTTACGGCCGATGACCTCTTGTGTGCAACAGCAGAGATAATGGGAAAAAGCACCTATGGAACTGTCTACAAGGCTACATTGGAGGATGGAAGCCAAGCTGCAGTTAAGAGATTGAGGGAAAAGATCACAAAAAGTCAGAGAGAATTTGAGTCTGAAGTTGCTGTGTTAGGGAGAATTAGACATCCAAATCTTTTGGCCCTAAGAGCTTATTACATGGGACCCAAAGGAGAAAAGCTTCTTGTGTTTGATTACATGCCTAATGGAAGTCTTGCTTCCTTCTTACATGCCAGAGGACCAGAAACAGTGATTGATTGGCCAACAAGGATGAGAATAGCGCAGGGCATGGCACGCGGCTTGTTCCACCTTCACTCTCGTGAGAACATCATACATGGGAACCTCACCTCCAGCAATGTGTTGCTTGATGAGAGCACAAATGCCAAGATAGCTGACTATGGTCTTTCCAGGTTGATGACAGCTGCGGCTAACTCCAATGTGATTGCAACGGCCGGAGCATTGGGGTACCGGGCGCCGGAGCTTTCAAAGCTGAAGAAAGCCAACACGAAAACCGATGTATACAGCCTTGGCGTTATCTTGTTAGAACTCCTAACGGGTAAGCCACCGGGTGAGGCTATGAATGGTGTGGATTTGCCACAATGGGTTGCCTCTATTGTGAAGGAGGAGTGGACTAATGAGGTGTTTGATGTTGAGTTGATGAGGGATGCATCAACAAATGGGGATGAGTTGCTCAACACTTTGAAGCTTGCTTTGCACTGTGTTGATCCTACTCCGTCGGCGCGGCCAGAAGCACAGCAAGTGCTCCAGCAGCTGGAAGAGATTAGGCAAGAGGTAGTATCAGCCAGTTCTGGTGATGATGGAGGCATCCCTTCAACTAGCGAATGA 2520 0.4337 MDTTRENNNNNQVIYQLGMRNVAHWHHLKWLLFLILLLPLKPVLCDDHWDGVVVTQSNFLALQAFKQELIDPKGFLKSWNDSGYGACSGGWAGIKCAQGQVIVIQLPWKGLKGHITQKISQLQGLRKLSLHDNQIGGSIPSSLGLLPNLRGVQLFNNKLTGSVPPSLGSCPLLQSLDLSNNLLTGQIPYTLGNLTKLYWLNLSFNSFNGSIPSSLTSLPSLTFLSLQHNNLSGSIPNSWGGKNGFFKLQNLILDHNFLSGTIPSLGSLVELREVSLGNNNFSGEIPFEIGKLSRLKTLDFSNNAFNGSLPATISNLSSLTLLNVENNHFTSQIPEALGRLHNLSVLVLSRNQFVGHIPHSIGNISTLTRLDLSLNNISGEIPDSFANLASLNSFNVSYNNLSGPVPTLLANKFNSSSFVGNIQLCGYSPSNPCPSQAPSQGVIVPTPESSKQHHHKKLGIKDIILIVAGVLLVVLVTICCILLVCLIRKRSTSDAEQDRAATRATTTRTGKGISPPAGAGDVETGGENGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKSQREFESEVAVLGRIRHPNLLALRAYYMGPKGEKLLVFDYMPNGSLASFLHARGPETVIDWPTRMRIAQGMARGLFHLHSRENIIHGNLTSSNVLLDESTNAKIADYGLSRLMTAAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDASTNGDELLNTLKLALHCVDPTPSARPEAQQVLQQLEEIRQEVVSASSGDDGGIPSTSE* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0859 839 Gene3D Ribonuclease Inhibitor 309 435 IPR032675 -
Ahy17g0859 839 Gene3D Ribonuclease Inhibitor 211 308 IPR032675 -
Ahy17g0859 839 MobiDBLite consensus disorder prediction 498 512 - -
Ahy17g0859 839 CDD STKc_IRAK 554 819 - -
Ahy17g0859 839 SUPERFAMILY L domain-like 95 429 - -
Ahy17g0859 839 SUPERFAMILY Protein kinase-like (PK-like) 552 821 IPR011009 -
Ahy17g0859 839 Gene3D Transferase(Phosphotransferase) domain 1 626 831 - -
Ahy17g0859 839 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 17 832 - -
Ahy17g0859 839 Pfam Leucine rich repeat 342 401 IPR001611 GO:0005515
Ahy17g0859 839 Pfam Leucine rich repeat 172 231 IPR001611 GO:0005515
Ahy17g0859 839 Gene3D Phosphorylase Kinase; domain 1 554 625 - -
Ahy17g0859 839 Pfam Protein tyrosine and serine/threonine kinase 551 816 IPR001245 GO:0004672|GO:0006468
Ahy17g0859 839 ProSiteProfiles Protein kinase domain profile. 548 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0859 839 MobiDBLite consensus disorder prediction 496 521 - -
Ahy17g0859 839 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 17 832 - -
Ahy17g0859 839 SMART LRR_typ_2 316 340 IPR003591 -
Ahy17g0859 839 SMART LRR_typ_2 218 241 IPR003591 -
Ahy17g0859 839 SMART LRR_typ_2 122 145 IPR003591 -
Ahy17g0859 839 SMART LRR_typ_2 388 411 IPR003591 -
Ahy17g0859 839 SMART LRR_typ_2 292 315 IPR003591 -
Ahy17g0859 839 SMART LRR_typ_2 146 170 IPR003591 -
Ahy17g0859 839 Pfam Leucine rich repeat N-terminal domain 60 96 IPR013210 -
Ahy17g0859 839 Gene3D Ribonuclease Inhibitor 56 210 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0859 Ahy-Chr17 9873477 9876660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0859 49 820 Receptor kinase-like Gene Family AT3G51740 64.820 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy17g0859 PK_Tyr_Ser-Thr 9.90E-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0859 - - gmx:100811174 1265.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0859 17 9873477 9876660 Ahy20g1313 20 27141863 27144976 ECH
Ahy17g0859 17 9873477 9876660 Ahy17g0859 17 9873477 9876660 ECH
Ahy17g0859 17 9873477 9876660 Ahy7g0687 7 7759072 7762178 hybridization
Ahy20g1313 20 27141863 27144976 Ahy17g0859 17 9873477 9876660 PCT
Ahy10g0972 10 18194145 18197252 Ahy17g0859 17 9873477 9876660 PCT
Ahy17g0859 17 9873477 9876660 Ahy20g1313 20 27141863 27144976 PCT
Ahy17g0859 17 9873477 9876660 Ahy10g0972 10 18194145 18197252 PCT