Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0835 ATGTCCAGAGAAAGGGAGAGATCAGATGATGAGGTAGGGAAGAAGATCAAGAGGGAAGGAGATGGTCAAAAAGGAAGGAGACAACACATGTTAGGTAGTCAACAACAAGCTGCTTCTGGAGGAACCCTAAATACAATCACCCCTTGTGCTGCATGCAAGCTCTTGAGAAGAAGATGTGCTCAAGAATGTCCCTTTTCTCCTTATTTCTCTCCTCATGAGCCCCAAAAGTTTGCTTCGGTTCACAAAGTCTTTGGTGCCAGCAATGTCTCAAAGTTGTTAATGGAAGTGCCTGAGAATCAAAGGGCTGATGCTGCAAATAGTCTAGTTTATGAAGCAAATGTGAGGCTAAAAGATCCAGTTTATGGATGCATGGGTGCAATTTCTTCTTTGCAACAACAAGTCCAATATCTAATAGCTGAACTCAATGCTGTGAGGGATGAAATAATCAAATACAAACTTAGGGAAGTTAATAATACCATCATACCCTCATCTTCTCATCATGTAATGCTTCCTTCTTCTTCATCATCGGAGGTCGTATCTATCGCCGTTCCGCCACCTCCTCCGCCACCTAATCATGACATACTTCCTCCTAATTCTTCAACTTCTTCTTCCATGGTTTACCCCCAACAGACTGATCCTTCCAATTATGGGACAATTTCAAGTGATAATATTTCCTATTTTGGTTGA 687 0.4178 MSRERERSDDEVGKKIKREGDGQKGRRQHMLGSQQQAASGGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKLLMEVPENQRADAANSLVYEANVRLKDPVYGCMGAISSLQQQVQYLIAELNAVRDEIIKYKLREVNNTIIPSSSHHVMLPSSSSSEVVSIAVPPPPPPPNHDILPPNSSTSSSMVYPQQTDPSNYGTISSDNISYFG* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0835 228 MobiDBLite consensus disorder prediction 1 40 - -
Ahy17g0835 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 228 - -
Ahy17g0835 228 MobiDBLite consensus disorder prediction 1 26 - -
Ahy17g0835 228 ProSiteProfiles LOB domain profile. 47 148 IPR004883 -
Ahy17g0835 228 MobiDBLite consensus disorder prediction 196 228 - -
Ahy17g0835 228 Pfam Lateral organ boundaries (LOB) domain 48 144 IPR004883 -
Ahy17g0835 228 MobiDBLite consensus disorder prediction 181 195 - -
Ahy17g0835 228 MobiDBLite consensus disorder prediction 178 228 - -
Ahy17g0835 228 Coils Coil 127 147 - -
Ahy17g0835 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 32 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0835 Ahy-Chr17 9624243 9626043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0835 41 228 AS2 family AT2G40470 67.196 4.10e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy17g0835 LOB 1.80E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0835 - - qsu:112036590 275.789