Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0774 ATGAGGAAGAGGGAGAGGGAAAACCCCTGTGGAGTGTGTGGGCACTATCACAAGTACGAAGAAGGTGAAGTGTGTTCGGTTTGCGGTCACCGGATTCCCGTTGGATCGGAGAAATCATCAGTGCAAGTTAGCGCCTTCCCGTCGGTGATCTTGCCGGAGTTTCTGTACCTCGGTAGCTACGACAACGCATCGCGCTCTGAGCTTCTCAAGACTCAAGGAATCTCTCGTATCCTCAATACTGTTCCTTCTTGTCAAAATCTCTACAAGAACTCATTTACCTATCACTGCCTACCAGATGATAAAACTTTGCCATTTGAAGAAGCAATTCAGTTTTTAGAGCAATGTGAGAAAGATAAGGCTCGTGTTCTGGTTCATTGCATGTCTGGAAAGAGTAGGTCTCCAGCCATCGTGATTGCATACTTAATGAAGTCAAAAGGATGGAGACTCGCACAAAGTTATCAATGGGTCAAGGAACGGCGACCATCTGTGGAATTAACAGAAGTTGTCTTCCAGCAACTGCAGGAGTTTGAGAACAAGATGTTTGGATCAATCGATGGTGGCGGCTCTGTTCTGGCTGGTTTCTCTCCTGCTTCAGGTCCGATCAACTTTGGCTTCCCAAAGATCAGTGAGTCGGCTCCATCACATCCTGCCTTCACTGCTGCTGGAACTACTTCAATATTCGCCCGACCACCCTTAGATATAGCTCCGGCCGAGTTCACATTTGGAGCTGGCCAAACACAGAAGGTTGTGACTGGAATCCCATTCAATGCAAATCCACCAAATCCAAATGGCACAGATATCCAAATGGATGGTTCTTGA 819 0.4713 MRKRERENPCGVCGHYHKYEEGEVCSVCGHRIPVGSEKSSVQVSAFPSVILPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYKNSFTYHCLPDDKTLPFEEAIQFLEQCEKDKARVLVHCMSGKSRSPAIVIAYLMKSKGWRLAQSYQWVKERRPSVELTEVVFQQLQEFENKMFGSIDGGGSVLAGFSPASGPINFGFPKISESAPSHPAFTAAGTTSIFARPPLDIAPAEFTFGAGQTQKVVTGIPFNANPPNPNGTDIQMDGS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0774 272 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
Ahy17g0774 272 Pfam Dual specificity phosphatase, catalytic domain 55 178 IPR000340 GO:0008138|GO:0016311
Ahy17g0774 272 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 272 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Ahy17g0774 272 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 181 IPR029021 -
Ahy17g0774 272 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 272 - -
Ahy17g0774 272 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
Ahy17g0774 272 Gene3D Protein tyrosine phosphatase superfamily 40 184 IPR029021 -
Ahy17g0774 272 CDD DSP_plant_IBR5-like 47 176 - -
Ahy17g0774 272 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Ahy17g0774 272 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0774 Ahy-Chr17 8587765 8592200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0774 1 169 Protein tyrosine phosphatase (PTP) family AT2G04550 76.744 1.28e-99 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0774 K04459 - gmx:100808721 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0774 17 8587765 8592200 Ahy17g0774 17 8587765 8592200 ECH
Ahy17g0774 17 8587765 8592200 Ahy7g0615 7 6635304 6639687 hybridization