Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0769 ATGATTCTTCACCTCAATCAAAATCGCTCCTTTCTCTTCGTAAAACCTAAGCTACCACCACCACCATTGCAACCACAAACCCGGTTACGTTTTTCCCTCAAAGCTCGAACCTTTCGAGTTTTTAAGTCCACCCATATCGCTACTTTGAATAACTTCTCTCCTGTTGAGTCTAAACGCGTGCCTCGTCATGTGAAAATTGAAGCTCAGCGTGTTCTTACGGATTACTTGCATTCAACACGTGGCTACAGCTTCTTGGATGCTGAGTATATCAGTAAGAATTGCCCCAACTTTGTTAAATCTTTGATTGCAAATACTTTTGTTGGTGGAAATGATGTCGATGTTGATGTTGATGGTGTTGCTCATTCATTGAGGAAGTTTCTAAGGAACAGGATTGGAGAGATTTATAAGGAAGCAAAAGAGGTATTTGGGTACCCTAAGGGGTTCTTGTTGGAGAAATTTAGAGAGTATGAAGAATTAGGGTTGAGTAAATCATTTATCATCAAGCTTGGTGTTTGTTGCCCTTCAATTTTGGTTTGTGATCATCATGGTGAATTTGTGGTTGTTCTTGATTGGTTAAAGAGAATTGGGATTGAAGATGATTGGATTGTGAGTTACATGTCTTATTCAAGGACATATAGTTGGAAGAAAATGCTTGATGCTATTCAACTTCTTGATGAAGTTGGTTATTCTGAGGAACAAATGCACAATTTGTTCAAGGCAAATCCTAAATTGTTATTGGAAGGTTTTGGGAAGAAGCTACGCTTGTTTTTGGTTAGATCACATAAGTTAGGTGTTAAGGTGAATGTTATGTATTCATATTTTATGGAATATCCTCATATACTATTAAACAAGTGTGCAAAAAATTTGTTGAGAGTGATTGATATTCTGTGTGCTATTGGAATGGAAACAGATGAAATTGCACGAATTTTGTCTAATTACATGCATCTATTCAGCACACATTCCTTCAAAGGTCCGAGAACTGTTATCTCGGAGTTGAAAGTTGAGAAAGCCGAATTACTCCAAGTCATAAAGGACGATCCACTGAAACTTATAAGTATGGCTTCAAGTTCGAAAAAGAAGAGCCCCAAACAGATATCAGTTTATGATCCGCGCAGACATTTAGACAAGATCACTTTCCTGCTGAAACTGGGGTATGCAGAGAACTCCGAGGAGATGGCGAATGCATTAAAAGTGTTCCGAGGGAGAGGTGATCTATTACAGGAGAGGTTTGATTGTTTGGTAGAAGCAGGTTTGGACTATAACAGTGTGATTGGAATGATAAAAAGAGCTCCTACGATTCTGAACCAAAAGAAAGATGTAATTAAAGAGAAGATTCATTTTGCCACAAACATCTTAGGCTATCCCTTAGAAAGCATTGTGGCATTCCCAACATACTTTTGCTATGATTTGGAGAAGATTGCTCAGAGGTTTTCAATGTATGCATGGTTGAAGGAGAGGAAGGTAGTGAATCCTTCCTTAACCTTGAGTACCATAGTTTCATCCAATGATAAACGGTTTGAAAAATATTTTGTAGATGTGCATCCTCAAGGTCCAACCATTTGGAAAAATATAAAGAGGTTATCAAAGAAAAACAAGAACAAGTAG 1605 0.3782 MILHLNQNRSFLFVKPKLPPPPLQPQTRLRFSLKARTFRVFKSTHIATLNNFSPVESKRVPRHVKIEAQRVLTDYLHSTRGYSFLDAEYISKNCPNFVKSLIANTFVGGNDVDVDVDGVAHSLRKFLRNRIGEIYKEAKEVFGYPKGFLLEKFREYEELGLSKSFIIKLGVCCPSILVCDHHGEFVVVLDWLKRIGIEDDWIVSYMSYSRTYSWKKMLDAIQLLDEVGYSEEQMHNLFKANPKLLLEGFGKKLRLFLVRSHKLGVKVNVMYSYFMEYPHILLNKCAKNLLRVIDILCAIGMETDEIARILSNYMHLFSTHSFKGPRTVISELKVEKAELLQVIKDDPLKLISMASSSKKKSPKQISVYDPRRHLDKITFLLKLGYAENSEEMANALKVFRGRGDLLQERFDCLVEAGLDYNSVIGMIKRAPTILNQKKDVIKEKIHFATNILGYPLESIVAFPTYFCYDLEKIAQRFSMYAWLKERKVVNPSLTLSTIVSSNDKRFEKYFVDVHPQGPTIWKNIKRLSKKNKNK* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0769 534 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 49 107 - -
Ahy17g0769 534 Pfam mTERF 150 246 IPR003690 GO:0003690|GO:0006355
Ahy17g0769 534 Pfam mTERF 221 437 IPR003690 GO:0003690|GO:0006355
Ahy17g0769 534 Pfam mTERF 404 507 IPR003690 GO:0003690|GO:0006355
Ahy17g0769 534 Gene3D Transcription termination factor 3, mitochondrial 257 522 IPR038538 -
Ahy17g0769 534 Gene3D Transcription termination factor 3, mitochondrial 115 256 IPR038538 -
Ahy17g0769 534 PANTHER CGI-12 PROTEIN-RELATED 121 526 IPR003690 GO:0003690|GO:0006355
Ahy17g0769 534 SMART mt_12 167 198 IPR003690 GO:0003690|GO:0006355
Ahy17g0769 534 SMART mt_12 132 162 IPR003690 GO:0003690|GO:0006355
Ahy17g0769 534 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Ahy17g0769 534 SMART mt_12 424 455 IPR003690 GO:0003690|GO:0006355
Ahy17g0769 534 SMART mt_12 456 489 IPR003690 GO:0003690|GO:0006355
Ahy17g0769 534 PANTHER CGI-12 PROTEIN-RELATED 49 107 IPR003690 GO:0003690|GO:0006355
Ahy17g0769 534 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 121 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0769 Ahy-Chr17 8497339 8499251 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy17g0769 mTERF 5.90E-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0769 - - aip:107606700 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0769 17 8497339 8499251 Ahy7g0610 7 6534387 6536491 hybridization