Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0761 ATGCCAGAAAACAGGCAGGTTCTGAGGAATGCTGCTTCTAATCAATCCGGTGACAACATTGAAGAAGCAATTCGGCGATTGAAAATCAATGACAATCGAGATAGAGATACTGCGGGTCAAACTAGCCCGTATCCGGATCGTCCTGGTGAACCTGATTGCTTATATTTTCTGAGGACTGGAATGTGTGGTTATGGGACTAACTGTCGCTACAATCACCCCGCTAATGTTTCACTGGGTACTCATTATGGTGAAGAGCTCCCTGAGAGAAACGGGCAACCTGATTGTGAGTATTTTCTTAAGACAGGGACATGTAAGTATGGATCATCGTGTAAATATCATCATCCACGGGACAGGCGAGGGGCTGCTCCTGTATCATTCAATGCTTTAGGCCTTCCAATGCGTCAGGAAGAAAAATCATGTCCCTATTACATGAGAACTGGGTCTTGTAAGTTTGGAGTAGCTTGCAAGTTTCATCATCCGCCGCATGCTACTTTTGGAGCTTCTGGAGTGGCTGCATCTCCTACCTCAATGATCCCCACATCTGGATATGTTGGTGGATATCCGTATTCCTTACCGAGAATGCCATATTTATCTGGACAGGGCCTTCAGTCTTATGTGCCTCCTTTCTTTTCTTCTCCACAAGGAATTATACAGGGTTGGAACAGCTACATGGGAAGTATGAACCCTGCAATGTCTACTGGTTTTCTTGGATCTAATCTTGTTTACGACTCTGTGAATCCGGGTGAGTCACTTTCTGGTGGGCAGGTAGTAAGTCTTAATCTCCCAGATAGGCCTGATCAGCCAGAATGCAGATACTATATGAACACAGGGACTTGCAAGTATGGATCTGATTGTAAGTTCCACCACCCGAAAGAAAGAATCGCCCAGTCATTCATAAATCCACTCGGCCTTCCTGTGCGACCTGGGCAAGCTATATGTTCTTATTATAGAATTTATGGAATATGCAAGTATGGCCCAACATGCAAATTTGATCATCCAGTTTTGGCAATCTCACAGAACTATCGCTTGGCCACACCTACTGCTTTATCTGCACTGGACACCCCTCTCGACGGAAATCGAAGAGGGACTTTCCAACCACCCGAGACATCACCATCTAAATTATCGAGTGACGAGCATCAGCATTCGGATAACAATATCAATAATTCACAGGCCGCTGAAGATTCATCCAAACAAGCTGATCATACTACCTCAAATTCCTTTGAAGTGGCCTCGGAATCCTCCTTACATGACCAAGATGCTTGA 1263 0.4497 MPENRQVLRNAASNQSGDNIEEAIRRLKINDNRDRDTAGQTSPYPDRPGEPDCLYFLRTGMCGYGTNCRYNHPANVSLGTHYGEELPERNGQPDCEYFLKTGTCKYGSSCKYHHPRDRRGAAPVSFNALGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPPHATFGASGVAASPTSMIPTSGYVGGYPYSLPRMPYLSGQGLQSYVPPFFSSPQGIIQGWNSYMGSMNPAMSTGFLGSNLVYDSVNPGESLSGGQVVSLNLPDRPDQPECRYYMNTGTCKYGSDCKFHHPKERIAQSFINPLGLPVRPGQAICSYYRIYGICKYGPTCKFDHPVLAISQNYRLATPTALSALDTPLDGNRRGTFQPPETSPSKLSSDEHQHSDNNINNSQAAEDSSKQADHTTSNSFEVASESSLHDQDA* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0761 420 ProSiteProfiles Zinc finger C3H1-type profile. 89 117 IPR000571 GO:0046872
Ahy17g0761 420 Gene3D - 45 120 - -
Ahy17g0761 420 MobiDBLite consensus disorder prediction 1 20 - -
Ahy17g0761 420 ProSiteProfiles Zinc finger C3H1-type profile. 264 292 IPR000571 GO:0046872
Ahy17g0761 420 PANTHER PROTEIN PHOSPHATASE RELATED 4 396 - -
Ahy17g0761 420 ProSiteProfiles Zinc finger C3H1-type profile. 134 162 IPR000571 GO:0046872
Ahy17g0761 420 Gene3D - 121 168 - -
Ahy17g0761 420 SUPERFAMILY CCCH zinc finger 305 333 IPR036855 GO:0046872
Ahy17g0761 420 ProSiteProfiles Zinc finger C3H1-type profile. 47 75 IPR000571 GO:0046872
Ahy17g0761 420 SUPERFAMILY CCCH zinc finger 133 162 IPR036855 GO:0046872
Ahy17g0761 420 MobiDBLite consensus disorder prediction 28 47 - -
Ahy17g0761 420 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 138 161 IPR000571 GO:0046872
Ahy17g0761 420 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 49 73 IPR000571 GO:0046872
Ahy17g0761 420 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 266 291 IPR000571 GO:0046872
Ahy17g0761 420 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 91 116 IPR000571 GO:0046872
Ahy17g0761 420 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 309 333 IPR000571 GO:0046872
Ahy17g0761 420 MobiDBLite consensus disorder prediction 352 420 - -
Ahy17g0761 420 ProSiteProfiles Zinc finger C3H1-type profile. 307 335 IPR000571 GO:0046872
Ahy17g0761 420 SUPERFAMILY CCCH zinc finger 94 118 IPR036855 GO:0046872
Ahy17g0761 420 SMART c3hfinal6 47 74 IPR000571 GO:0046872
Ahy17g0761 420 SMART c3hfinal6 89 116 IPR000571 GO:0046872
Ahy17g0761 420 SMART c3hfinal6 136 161 IPR000571 GO:0046872
Ahy17g0761 420 SMART c3hfinal6 264 291 IPR000571 GO:0046872
Ahy17g0761 420 SMART c3hfinal6 307 334 IPR000571 GO:0046872
Ahy17g0761 420 SUPERFAMILY CCCH zinc finger 268 293 IPR036855 GO:0046872
Ahy17g0761 420 MobiDBLite consensus disorder prediction 381 413 - -
Ahy17g0761 420 Gene3D - 264 348 - -
Ahy17g0761 420 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26 4 396 - -
Ahy17g0761 420 SUPERFAMILY CCCH zinc finger 52 74 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0761 Ahy-Chr17 8390010 8394346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0761 1 411 C3H Transcription Factor Family AT1G04990 45.497 5.36e-112 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy17g0761 zf-CCCH 4.90E-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0761 - - vra:106765262 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0761 17 8390010 8394346 Ahy17g0761 17 8390010 8394346 ECH
Ahy17g0761 17 8390010 8394346 Ahy7g0601 7 6424938 6429025 hybridization