Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0758 ATGCAAGTAGCAGAACTCCAACAAAACCTGGTTCAACACCAACACAAAGAGAACAAGATCATGTGCAAGAAGATCCAGCTAAGTGTCTCTGACACTGAGCTCCATAATAATCACCATCATAATTCATGTGGTTGTGATGTTGATGGGTGCCACAAGGTTGAGGGTGAGGATCTATTCATTCCACCCCTCAATTTTGCAATGGTTGATAATGGCATTTTCAGGTCTGGTTTCCCTGAACCTGCTAACTTCTCCTTCCTTCAGACCCTTGCTCTCCGCTCTATCATATATCTATGTCCTGAGCCATATCCAGAGGCTAACATGGAGTTCCTCAAGTCAAATGGGATCAAGCTTTATCAATTTGGAATTGAGGGTCATAAGGAGCCTTTTGTAAACATCCCAGAAGACACAATCCGTGAAGCATTAAAAGTTGTCCTTGATGTCAGGAACCATCCACTTATAATTCATTGTAAGCGGGGGAAGCACCGAACAGGGTGTTTAGTAGGATGCTATAGGAAGTTGCAGAAATGGTGTTTGTCTTCTGTGTTTGATGAATACCAACGCTTTGCAGCTGCAAAAGCAAGAGTTTCAGATCAGAGGTTGGATTGA 606 0.429 MQVAELQQNLVQHQHKENKIMCKKIQLSVSDTELHNNHHHNSCGCDVDGCHKVEGEDLFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLALRSIIYLCPEPYPEANMEFLKSNGIKLYQFGIEGHKEPFVNIPEDTIREALKVVLDVRNHPLIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRLD* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0758 201 PANTHER TYROSINE-PROTEIN PHOSPHATASE 11 200 - -
Ahy17g0758 201 Pfam Tyrosine phosphatase family 60 199 IPR004861 -
Ahy17g0758 201 Gene3D Protein tyrosine phosphatase superfamily 58 200 IPR029021 -
Ahy17g0758 201 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 11 200 - -
Ahy17g0758 201 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 60 200 IPR029021 -
Ahy17g0758 201 ProSitePatterns Tyrosine specific protein phosphatases active site. 154 164 IPR016130 GO:0016311|GO:0016791
Ahy17g0758 201 ProSiteProfiles Dual specificity protein phosphatase domain profile. 64 201 IPR020422 GO:0006470|GO:0008138
Ahy17g0758 201 PRINTS Plant and fungal dual specificity phosphatase signature 132 146 IPR020428 GO:0016791
Ahy17g0758 201 PRINTS Plant and fungal dual specificity phosphatase signature 59 76 IPR020428 GO:0016791
Ahy17g0758 201 PRINTS Plant and fungal dual specificity phosphatase signature 115 129 IPR020428 GO:0016791
Ahy17g0758 201 PRINTS Plant and fungal dual specificity phosphatase signature 96 109 IPR020428 GO:0016791
Ahy17g0758 201 CDD PFA-DSP_Siw14 58 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0758 Ahy-Chr17 8263472 8270309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0758 55 200 Protein tyrosine phosphatase (PTP) family AT4G03960 77.397 4.76e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0758 K18045 - gmx:100814279 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0758 17 8263472 8270309 Ahy17g0758 17 8263472 8270309 ECH
Ahy17g0758 17 8263472 8270309 Ahy7g0598 7 6280471 6286996 hybridization