Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0710 ATGAAACAACCCAGATTCATATTTTCATCATTTTTCTTCCTCTTGGTGGTGGTAGATTTTGTAATTCTACCCATCAATGCAGAGTCAAAGTGTAGTGAGAGTTGTGGCTTAGCTTTAGCTTCCTACTATCTTTGGGATAATTCTAACCTCACATATATTGCAACTGTGATGAAATCAGAATATGTTACAAGATCACAAGGTGAAGATATTGTGAGCTACAACAATGGCACCATAAAAAGCAAAGATTCAGTCACATCCTCCACCAGAATCAATGTTCCATTCCCTTGTGAATGCATCAATGGTGAGTTTCTTGGCCATGTATTTCAATACTCAGTTTTGAGCAGTGACACCTATGATACCATTGCAAATTGGAGCTATTCAAACTTGGTCACTGCTGAGTGGTTGCAGAATACCAATACTTATTCACCAAATAATATTCCTTATCCTGCAACTGTTAATGTCACTGTTAACTGTTCCTGTGGGAATGGTGATGTTAGCAAGGATTATGGGTTGTTCATCACTTACCCTCTTAGACCTGAGGATTCTTTGGAGTCAATTGCAAACAAGACAAAGATTGATGCTAAGTTGCTGCAGGGATATAACCCTGGTGTGAATTTCAGCAAAGGGAGTGGTCTGGTTTATATTCCTGGGAAAGATGAAAATGGCAACTATGTGCCCTTTAAACTAAGCAATGGAGGGAAGGGTCTATCCGGTGGCGTTATTGGTGGAATATCTGTTGGAATAGTAGCAGCACTTCTGTTATTGGTATTTGGTGTTTATGTTAAATGTTACAGAAGAAAGAAGATTTGGAACAAAAAATTGGTAGCTAAAGATTCCAGCGAGAACTTTGTTCGCCAAGGCGAAACCTCTCATAATGCTGAAAACACAACTTCAGCTTCTGATGATACTAGTATTATAGGTGTTAAGGTAGAAAAATCAGCAGAGTTTTCGTATGAAGAACTAGCCAATGCCACAAATAACTTCAGTTTGGCTAAAAAGATTGGTCAAGGTGGTTTTGGTGAAGTCTATTATGGAGAGCTCAATGGCGAGAGAGCTGCAATTAAGAAGATGGACATGAAAGCATCAAAAGAATTTCTCGCGGAACTGAAAGTGTTGACGCGTGTTCATCACTTAAACTTGGTACGCTTGATTGGATATTGTGTCGAGGGCTCTCTTTTCCTTGTGTATGAATATATCGAAAATGGAAACTTAAGCCAGCATCTGCGAAATTCAGATAGTGAGCCTTTACCATGGTCTACCCGGGTTCAAATTGCTCTGGACTCGGCCAGAGGACTTGAATACATTCATGAGCATACGATGCCTGTATATATCCATCGCGATGTAAAGTCGGAAAATATTTTATTAGACAGAAACTTCCGTGGAAAGGTTGCGGATTTTGGACTGACCAAGCTGATTGATGTTGGAAATTCATCAGCTCCAACTGCTAATATGGCCGGCACATTCGGCTACATGCCACCAGAATATGTATATGGAAGTGTTTCTCCCAAAATAGATGTATATGCTTTTGGAGTAGTTCTTTATGAGCTTATTTCTGCAAAAGAAGCTCTGATGAGGAGTGGTGGTGCATCTGGTGCTGAATTGAAGGGCCTTGTGGCTTTGTTTGAGGAAGTTTTTATCCAGCCAGACCCCAAAGAAGGTCTTAAAGAAATGGTGGATCCTAGGCTTGGAGATAACTATTCAATTGAATCAGTTTATAAGATGGCACAACTTGCCAAGGCATGTACAGAGGGAGATCCGCAGCGGCGGCCGAAGATGAGATCGGTGGTGGTTGCTCTTATGACACTAAGTTCAACCACTGAGAATTGGGACATTGCTTCCTTTTATGAAAATCCAGCTCTTGTAAATCTTATGTCTGGTAGATAG 1884 0.405 MKQPRFIFSSFFFLLVVVDFVILPINAESKCSESCGLALASYYLWDNSNLTYIATVMKSEYVTRSQGEDIVSYNNGTIKSKDSVTSSTRINVPFPCECINGEFLGHVFQYSVLSSDTYDTIANWSYSNLVTAEWLQNTNTYSPNNIPYPATVNVTVNCSCGNGDVSKDYGLFITYPLRPEDSLESIANKTKIDAKLLQGYNPGVNFSKGSGLVYIPGKDENGNYVPFKLSNGGKGLSGGVIGGISVGIVAALLLLVFGVYVKCYRRKKIWNKKLVAKDSSENFVRQGETSHNAENTTSASDDTSIIGVKVEKSAEFSYEELANATNNFSLAKKIGQGGFGEVYYGELNGERAAIKKMDMKASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRNSDSEPLPWSTRVQIALDSARGLEYIHEHTMPVYIHRDVKSENILLDRNFRGKVADFGLTKLIDVGNSSAPTANMAGTFGYMPPEYVYGSVSPKIDVYAFGVVLYELISAKEALMRSGGASGAELKGLVALFEEVFIQPDPKEGLKEMVDPRLGDNYSIESVYKMAQLAKACTEGDPQRRPKMRSVVVALMTLSSTTENWDIASFYENPALVNLMSGR* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0710 627 Gene3D Phosphorylase Kinase; domain 1 298 398 - -
Ahy17g0710 627 PANTHER LYSM RECEPTOR KINASE 1B 17 627 - -
Ahy17g0710 627 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Ahy17g0710 627 SMART serkin_6 328 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0710 627 Gene3D Transferase(Phosphotransferase) domain 1 399 617 - -
Ahy17g0710 627 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 17 627 IPR044812 GO:0019199|GO:0045087
Ahy17g0710 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Ahy17g0710 627 Pfam Protein tyrosine and serine/threonine kinase 329 597 IPR001245 GO:0004672|GO:0006468
Ahy17g0710 627 CDD STKc_IRAK 334 596 - -
Ahy17g0710 627 ProSiteProfiles Protein kinase domain profile. 328 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0710 627 SUPERFAMILY Protein kinase-like (PK-like) 309 599 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0710 Ahy-Chr17 7578132 7582186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0710 4 627 Receptor kinase-like Gene Family AT3G21630 56.604 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Ahy17g0710 PK_Tyr_Ser-Thr 8.70E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0710 - K13429 mtr:MTR_5g086030 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0710 17 7578132 7582186 Ahy17g0710 17 7578132 7582186 ECH
Ahy17g0710 17 7578132 7582186 Ahy7g0556 7 5786409 5790365 hybridization