Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0678 ATGCGTATGAGTAGTGTCACACTCTTCTTGATTCTTTGCTTCTCTACCTCCTTGTATGATGCTTCTGCTCTTGCCTCTGATGGTGTCACTCTCCTTTCACTCTTGACTCATTGGACCTTTGTTCCACCCATCATAAACTCCACGTGGAAGGGCTCTGATTCGGTTCCGTGCTCGTGGATTGGAGTCCAATGCAACCATGCCTATAATGTGATCTCCCTTAATCTCAGTGATCTTGGGATTCAAGGTCAACTTGGACCAGAAATAGGACAATTATATCGCTTGCAGACCCTTGTGTTGTCGAATAATGGTTTCTTAGGAGAGGTACCTTCAGAGCTAAGTAACTGTACTTTGCTTCAGGTCTTAGACCTTTCTAATAACAGCTTTAGCGGACTGATACCAAATAGCTTCAAGAAGTTGCAAAGCTTACGCAGCATGAATTTGTCGTCTAATCTATTGGGTGGTACGATTCCCGATTCCTTGTTTCAAATTCGTCAGCTTGAAGAAATGAACCTTCACAATAACCATCTCAGTGGTCCTATACCATCCAGTACGATTCCTTCATCCATTGGTAATTGCAGTAAACTAGAGGAATTGTTTCTGAATGAGAACAGATTGAATGGGGAACTATCTTTGGAGATGGCAAAGCTCAAGAATCTAAAGACTATGTCTTTGTTTGACAACCAGTTCTTAGGAGTCATTCCTCAAGACTTGGGAATCAATAGCAGCATAGTGAAACTGGACTTTACAAATAATAAGTTCACTGGTAATCTTCCACCAAGTCTTTGCTTTCGAAAGAAGTTACAAGTGCTGAACATGGGATCTAATCGACTTCAAGGTAACATACCTTCTGATGTAGGAAGGTGTACAAGTCTGAGTATGGTGATTCTCAGTGAAAATAATTTCATTGTTTTTGAGAGTAATATGAACCTCAAATACTTACACATAAGCAAGAACAACATCAGTGGACCAATTCCACCAAGTCTAGAAAATTGTACAAATCTTGCTGCAATTAACATGTCACTGAACAAGTTTAATGGGCTCATACCATCTGCACTTGGAAAGCTTGTGAATCTTACGATTTTGGATCTTTCACACAACAATTTGGAAGGACCTTTGCCACCACAGCTGTCAAATTGTACTAAAATGGATCATTTTGATGTTGGATTCAATTCCCTAAACGGTTCCTTCCCATCAAGTCTGAGGAACTGGACAGGGATAACCACATTAATTTTAAGAGAGAATCATTTTACAGGTGGTATCCCGAGCTTTTTCTCAGAACTTAGCAAGCTTCGTGAACTACAACTTGGTGGAAATTTGATTGGAGGAACAATTCCTCCATCATTGGGAAAACTGCAGAATCTGTTCTATGGGTTGAATTTGAGTAGCAATGGATTGACAGGAAACATAGATGTTCTTGATAAACTACTTTCATTGACTGAGATCAATATTTCAAACAATTTCTTGCATGGTCCTGTTCCGAAATCTCTCTTTAAGTTTCTGAATTCCTCGTCATCTTCTTTCTTGGCTATGCTGGTAGCTCTACTTTTGATGTATCTCCGCAAGAAAGAAATGAAGAATGATGTCTATGGTGAAAAATGGTTGTCTGTTATTAAGTTCTTCACTGAAAACCAGTCAGCTCCCCTTCACGACATAGTGATGCAGGCTACAGATAACCTAAATGATCAGTACATTATTGGCAGAGGAGCTCATGGGATTGTTTATAGAGCTCAACTGGGTTATACGACTTTTGCGGTAAAGAAGATTGCATTTGAAAGGAACAAGAGGAAGTATTTACATATTATGCGGAAAGAAATTGAAGTGCTGGGAGGGATCAAGCATAGAAACTTGGTCTCTTGTGCAGACTACTGGATAGGAGAGAACTATGGTTTAGTCTTATATAAATACATGAAGAATGGAAGCCTCCATGACATTTTGCATGGGAAACATCCCCACTACCCTTATGTTGAATATACGGCTTAA 1980 0.396 MRMSSVTLFLILCFSTSLYDASALASDGVTLLSLLTHWTFVPPIINSTWKGSDSVPCSWIGVQCNHAYNVISLNLSDLGIQGQLGPEIGQLYRLQTLVLSNNGFLGEVPSELSNCTLLQVLDLSNNSFSGLIPNSFKKLQSLRSMNLSSNLLGGTIPDSLFQIRQLEEMNLHNNHLSGPIPSSTIPSSIGNCSKLEELFLNENRLNGELSLEMAKLKNLKTMSLFDNQFLGVIPQDLGINSSIVKLDFTNNKFTGNLPPSLCFRKKLQVLNMGSNRLQGNIPSDVGRCTSLSMVILSENNFIVFESNMNLKYLHISKNNISGPIPPSLENCTNLAAINMSLNKFNGLIPSALGKLVNLTILDLSHNNLEGPLPPQLSNCTKMDHFDVGFNSLNGSFPSSLRNWTGITTLILRENHFTGGIPSFFSELSKLRELQLGGNLIGGTIPPSLGKLQNLFYGLNLSSNGLTGNIDVLDKLLSLTEINISNNFLHGPVPKSLFKFLNSSSSSFLAMLVALLLMYLRKKEMKNDVYGEKWLSVIKFFTENQSAPLHDIVMQATDNLNDQYIIGRGAHGIVYRAQLGYTTFAVKKIAFERNKRKYLHIMRKEIEVLGGIKHRNLVSCADYWIGENYGLVLYKYMKNGSLHDILHGKHPHYPYVEYTA* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0678 659 ProSitePatterns Protein kinases ATP-binding region signature. 565 587 IPR017441 GO:0005524
Ahy17g0678 659 SUPERFAMILY L domain-like 304 499 - -
Ahy17g0678 659 Gene3D Ribonuclease Inhibitor 304 509 IPR032675 -
Ahy17g0678 659 Gene3D Ribonuclease Inhibitor 184 303 IPR032675 -
Ahy17g0678 659 ProSiteProfiles Protein kinase domain profile. 559 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0678 659 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 510 651 - -
Ahy17g0678 659 Pfam Protein kinase domain 563 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0678 659 Gene3D Transferase(Phosphotransferase) domain 1 541 657 - -
Ahy17g0678 659 Gene3D Ribonuclease Inhibitor 27 183 IPR032675 -
Ahy17g0678 659 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Ahy17g0678 659 Pfam Leucine rich repeat 309 368 IPR001611 GO:0005515
Ahy17g0678 659 PRINTS Leucine-rich repeat signature 118 131 - -
Ahy17g0678 659 PRINTS Leucine-rich repeat signature 355 368 - -
Ahy17g0678 659 PANTHER OS08G0446200 PROTEIN 184 508 - -
Ahy17g0678 659 PANTHER OS08G0446200 PROTEIN 510 651 - -
Ahy17g0678 659 PANTHER OS08G0446200 PROTEIN 6 207 - -
Ahy17g0678 659 SMART LRR_typ_2 139 163 IPR003591 -
Ahy17g0678 659 SMART LRR_typ_2 116 138 IPR003591 -
Ahy17g0678 659 SMART LRR_typ_2 355 379 IPR003591 -
Ahy17g0678 659 SMART LRR_typ_2 427 451 IPR003591 -
Ahy17g0678 659 SMART LRR_typ_2 91 115 IPR003591 -
Ahy17g0678 659 SMART LRR_typ_2 164 192 IPR003591 -
Ahy17g0678 659 SUPERFAMILY RNI-like 72 369 - -
Ahy17g0678 659 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Ahy17g0678 659 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 184 508 - -
Ahy17g0678 659 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 207 - -
Ahy17g0678 659 SUPERFAMILY Protein kinase-like (PK-like) 543 650 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0678 Ahy-Chr17 7058410 7060674 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0678 69 659 Receptor kinase-like Gene Family AT1G73080 38.724 4.31e-141 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy17g0678 Pkinase 3.90E-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0678 - - aip:107608088 927.161