Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0675 TTTAACACCAGAGGAAAAGAAGCTTTGTCTGATTTGAATCCCGAAATCAAGGAACTTAAAGAGCAGCTTGTTGCATGCAAGACTGATCGTATCGAGACGGAAGCACGGAAAGCGGAGCTGGAAACTAATCTAACAACAAACCTGAGGAGAAGAAAGCAAGAGTTGGAAGCTGTAATATCATCTGCTGATGATGACACTCTGGGTGTAGATGCTGGATTGAAGGCGCAGGAACTTAGCGATGCTAAATTGTTAGTTGATGATGCAACGGAGCAGCTTAGTAGAGTCTCTAATAGTATAAGTGCACGATCAAAGGAAATTAAACAGATCAAAGAAGAAATCAATAAGTTGAAGTCTTTGGAGGATGAGTATGAAAGAAAACTTCAGGAAGAAACAAAAGAATTAGAGCAGTTGCTGAGTAAAAAAAATATATATTCTGCTAAAGAAGAGGAATATGCAAAGAAAATAAGGGAACTGGGCCCATTGACATCAGATGCATTTGAGACGTACAAAAGGAGGAATATCAAAGAATTGCATAAAGCGTTGCACAGGTGCAATGATCAACTGCAGCAGTTCAGTCATGTAAACAAGAAAGCGCTTGACCAGTATATAAATTTGACAGAACAACGAGAGGAACTTCAGAAAAGGCAAGCTGAACTTGATGCAGGAGATGAGAAAATTAGAGAGCTAATATCTGTACTTGATCAACGGAAGGATGAATCAATAGAGCGCACTTTCAAAGGTGTTGCTTGGCATTTTCAAAAAGTGTTTTCTGAACTCGTACCGGGGGGTCATGGTCTTCTGTTTATGATGAAGAAGAAGGAGGGTGGTCACGATGATGATGAGGATGATGAGGTTGGTCCTCGTGAAGCAAACCCAGAGGGTAGAGTAGAAAAGTACATTGGAGTGGAAGTGAAGGTTTCTTTTACTGGACAAGGAAAGACACAGTCCATGAAGCAGTTGTCTGGGGGTCAAAAGACTGTAGTTGCTCTTACACTTATCTTTGCCATACAACGATGTGATCCTGCTCCGTTTTATCTATTTGATGAGATTGATGCGGCTCTGGATCCACGATACAGAACTGCTGTTGGAAATATGATCCGCTGTCTGGCAGACTTTTCAACCACACAATTTATCACAACAACATTCCGCCCAGAGCTTGTGACAGTTGCTGACAAGATCTATGAAGTAACGCATAAAAGCCGGGTTAGCCGTGTTAATGTTGTATCCAAGGACGATGCTAGATTGTTTCAAAAATTAAAAACCAATGAGCGGTTTATACTATAG 1284 0.4089 FNTRGKEALSDLNPEIKELKEQLVACKTDRIETEARKAELETNLTTNLRRRKQELEAVISSADDDTLGVDAGLKAQELSDAKLLVDDATEQLSRVSNSISARSKEIKQIKEEINKLKSLEDEYERKLQEETKELEQLLSKKNIYSAKEEEYAKKIRELGPLTSDAFETYKRRNIKELHKALHRCNDQLQQFSHVNKKALDQYINLTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIERTFKGVAWHFQKVFSELVPGGHGLLFMMKKKEGGHDDDEDDEVGPREANPEGRVEKYIGVEVKVSFTGQGKTQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPRYRTAVGNMIRCLADFSTTQFITTTFRPELVTVADKIYEVTHKSRVSRVNVVSKDDARLFQKLKTNERFIL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0675 427 Coils Coil 99 147 - -
Ahy17g0675 427 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6 416 - -
Ahy17g0675 427 Gene3D - 207 416 IPR027417 -
Ahy17g0675 427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 412 IPR027417 -
Ahy17g0675 427 Coils Coil 195 225 - -
Ahy17g0675 427 Pfam RecF/RecN/SMC N terminal domain 107 400 IPR003395 -
Ahy17g0675 427 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 6 416 - -
Ahy17g0675 427 Coils Coil 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0675 Ahy-Chr17 7043272 7047118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0675 301 386 Structural Maintenance of Chromosomes family AT5G15920 29.670 2.56e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0675 K06669 - lja:Lj2g3v2905090.1 647.506