Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0660 ATGGCCGGAACCTCGACGACGCCAGAGAAGTCGGCGACGGCGATGGCGCTGATGTCTCCGACGACCTCGCGGTCGGTGACGCAGACGGTGAACGGCTCACATAAGTTTGTGATCCAGGGTTACTCTTTGGCGAAGGGTATGGGAATCGGAAAACACATCGCGAGCGACGTTTTCTGTGTCGGAGGTTACCAGTGGGCGATCTACTTCTACCCCGACGGGAAGAATCCGGAGGATAACTCAGCTTACGTTTCGGCGTTCATCGCTCTCGCTAGCGAAGGAACCGATGTGAGGGCGCTTTTCGAGCTCACGCTTGTTGATCAGAGTGGACAGGGAAAGCATAAGGTCCATAGCCACTTCGATCGGTCGCTCGAGAGTGGACCTTACACCCTCAAGTACAAGGGAAGCATGTGGGGGTACAAGCGGTTTTTCAGACGGTCTGTGCTTGAAACCTCTGATTTTCTTAAGAACGATTGCTTGAAAATCAACTGTACAGTTGGAGTTGTGGTTTCAGCTACAGATTGTCCGCAACTTCACTCTATCAGTGTACCAGAGTCAGACATCGGATCTCATTTTGGTATGCTATTGGAAAATATGGAAGGCTCAGATGTTACTTTTGATGTAGCTGGGGAGAAGTTTCCTGCTCATAAGTTAGTGTTGGCTGCTAGATCCCCTCAATTTCGATCGAAGTTTTTCGAAGGCTTAGATGCAGAAAAGCGAGAGATCACAATATCAGATTTAGAACCTAAGGTTTTTAAGGCCATGCTGCACTTTGTCTATAGGGATACCCTTACAGAAGAGGTGGACATGGTTCCATCTACCACATATAGTGATTTTCCAGCTTCGGATACATTGAAAGGGAAGTTGTTAGCTGCAGCAGACAAGTATGGCTTGGAGAGGCTTAAACTGATGTGTGAATCTTGTCTTTGCAAGGACATTTGTGTGAGTTCCGTGGCCAATATTTTGACTTTGGCTGACAATTGCCATGCTACAGAGTTAAAATCTGTTTGCCTAAAATTTGCTGCTCAAAATCTAGCAGCTGTTATGAGGTCAGATGGATTTGAGCATATGAAAGAAAAATGCCCATGGCTACAGTCAGAGATCTTGAAGACAATTGCGGGCTGTGAGAGTGACAATTGCAGCGGAGGGGAAAAATCTCAGAGCGTGTGGGCGCAGCTATCAGAAGGTGGTGACACAAATGGTGATCATGCTGATAAAAATGATAAAGGCAAAGGAGAGGGAAAACCCTTTTCTGTCCAACTTCCCAATGTTTCAATGGGTAGTAGTTTAGGAAAAAGAGGTAGACCACTACTAGTGGTATGCGTATGCAGGTTTTTGTTGTCAATGTCACAAGTGATGTGTATGTTGCTAGTGCAGAGAAGTCACTAA 1386 0.4646 MAGTSTTPEKSATAMALMSPTTSRSVTQTVNGSHKFVIQGYSLAKGMGIGKHIASDVFCVGGYQWAIYFYPDGKNPEDNSAYVSAFIALASEGTDVRALFELTLVDQSGQGKHKVHSHFDRSLESGPYTLKYKGSMWGYKRFFRRSVLETSDFLKNDCLKINCTVGVVVSATDCPQLHSISVPESDIGSHFGMLLENMEGSDVTFDVAGEKFPAHKLVLAARSPQFRSKFFEGLDAEKREITISDLEPKVFKAMLHFVYRDTLTEEVDMVPSTTYSDFPASDTLKGKLLAAADKYGLERLKLMCESCLCKDICVSSVANILTLADNCHATELKSVCLKFAAQNLAAVMRSDGFEHMKEKCPWLQSEILKTIAGCESDNCSGGEKSQSVWAQLSEGGDTNGDHADKNDKGKGEGKPFSVQLPNVSMGSSLGKRGRPLLVVCVCRFLLSMSQVMCMLLVQRSH* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0660 461 Gene3D - 311 386 - -
Ahy17g0660 461 SUPERFAMILY POZ domain 179 312 IPR011333 -
Ahy17g0660 461 ProSiteProfiles MATH/TRAF domain profile. 31 165 IPR002083 GO:0005515
Ahy17g0660 461 MobiDBLite consensus disorder prediction 392 419 - -
Ahy17g0660 461 Gene3D Potassium Channel Kv1.1; Chain A 177 306 IPR011333 -
Ahy17g0660 461 MobiDBLite consensus disorder prediction 398 412 - -
Ahy17g0660 461 SMART math_3 36 148 IPR002083 GO:0005515
Ahy17g0660 461 CDD BACK_AtBPM-like 309 370 IPR034090 -
Ahy17g0660 461 CDD BTB_POZ_BPM_plant 187 309 - -
Ahy17g0660 461 SUPERFAMILY TRAF domain-like 29 172 - -
Ahy17g0660 461 Pfam BTB/POZ domain 194 310 IPR000210 GO:0005515
Ahy17g0660 461 ProSiteProfiles BTB domain profile. 201 267 IPR000210 GO:0005515
Ahy17g0660 461 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 30 169 IPR008974 GO:0005515
Ahy17g0660 461 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 4-LIKE 14 384 - -
Ahy17g0660 461 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 14 384 IPR045005 GO:0016567
Ahy17g0660 461 SMART BTB_4 201 312 IPR000210 GO:0005515
Ahy17g0660 461 CDD MATH 32 165 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0660 Ahy-Chr17 6789191 6793871 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Ahy17g0660 BTB 6.20E-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0660 K10523 - gmx:100806769 685.641