Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0650 ATGTCCAAGTGGTACTTAAACATGGGGGAAAGAAGTGGCCATCTATCTGCTACAGATGATGGAGCTGCTGAACCTAGTGATGGGGAAGTTAACAATGCTGAAAACTCTGGTTCTCATGTTGAGGATGGGGCTTCCGAGCCACATCTTGGTATGGGGTTTGAATCTGAAGATGCTGCAAAGAATTTCTATAACGAGTATGCCCGACGTTTGGGTTTCACTCCCAAAGCTAGCCCGCAGAGTCGTTCAAAACCTGATGGGGCAAATGCGTATCGGGAATTTGTTTGTGGTGGCGATGGTTTAAAAAGAAAGCCTAATGAAACTTGTAATGCAATGATTAGGATAGAGCGAAAGGGTCAACATAAGTGGTTTGTTACAAAATTTGTGAAGGAGCATAGTCATTCCACGTCAAGTTCCGGTGAAGTGCACAGTCTTCAGCCACGAAGGCACTTTTCTAGTGTTGGAAGAACAATGCCTGAAACTTACCAAGGAGTGGGGCTTGTTCCCAGTGGTGTCATGTATATATCTATGGATAGGGCTCCTGGGAATCGCAATTCCACTGAGAACATTCATGGTAGTAGGAATTTTCCTGCAGTTGGTGCTAAGACTAATCACCAAGTTTCTGCAGTTGCTACCAAGACTAATCACCAAGTTCCTGCAGTTGCTGCTAAGACTAATCACCAAGTTCCTGCAGTTGTTGCGAAGACTAATCACCAAATAAAAAATTCTACATCAATTAATTATACTGTTAAACAGCCTGTTCAGAAGAAGACACTTGGGAGGGATTGTCAGAACCTGCTGGAGTATTTTAAGAGAATGCAGGCGGAAAACCCTGGTTTCTTCTATGCTATACAACTTGATGAAGATAACCATATGTCTAATGTGTTTTGGGCAGATGCAAGATCAAGGAGTGCTTACAATCATTTCGGTGATGCAATTAGTCTGGACACAACATTCAAAGTGTATCAATACAAAGTGCCATTTGTACCATTCACTGGGGTAAACCATCATGGCCAGACAATTTTATTTGGTTCTGCACTCCTTTTGGATGATTCTGAAGATTCTTTTGTGTGGCTTCTCAAGACATTTCTGACAGCAATGAATGACCGCCACCCCATTTCTATCACTACTGGTCAAGATAGAGCCATTCAGAGTGCAGTTTCACAAGTTTTCCCCCATGCACGGCACTGTCTAAACAAGTGGGATGTCTTGAGAGAAGGTCAGGAAAGGTTGGCTCATGTATGTCACATGCATCCAAATTTTCAGGGTGAACTTTATAATTGTATTAACCTGACCGAAACGATTGAAGAGTTTGATTCATCTTGGAATTCTATTATGGAAAAGTATGAACTTGGAAGAAATGAATGGCTGCAGTCATTGTACAATGCTCGTGCTCAGTGGGTCCCAGCATATTTCCGTGATTCATTTTTTGCTGCAATATCTCCTAATCATGGATTTGATAGCTCTTTTTTCGATGGTTTTGTTAACCCGCAAACAACATTACCAATTTTCTTTAGGCAGTATGAACAAGCTATGGAGATGTGGTTTGAAAGGGAAATAGAATTAGATTCTGAGACAATTTGCAGCCAACCTGTTTTGAAGACACCTTCACCAATGGAGAAACAGACTGCTAATCTTTATACACGAAAAGTATTTTCAAAGTTTCAAGAGGAACTAGTTGAAACTTTTGTTTATACTGCAAACAGAATTGAAGAAGAAGGGGCAAATAGCATATTCAGGGTTGCTAAATTTGAGGATGACCAAAAGGCATATATTGTCACATTAAACCATTCCGAGTTGAAGGCTGACTGTAGTTGTCAAATGTTTGAGTATTCAGGCATTCTGTGTAGGCATGTCCTTACTGTTTTCACTGTTACTAATGTACTTACTTTACCATCCCATTACATCTTGAAACGGTGGACAAGGAATGCAAAAAGTTATGTTGGATTGGATGAACATGCCAGTGAATCACATGGACTGGATTCTATGACATCTCGGTATGGCACTCTGTGTCGAGAAGCCATAAAATATGCGGAGGATGGGGCAATATCTGTGGAAACTTATAGTGCTGCAATGGGTGCTCTTAGAGATGTAGGAAAGAAAGTTGCTGTCGCAAAGCGAAATTTTGCAAAAGTTGCACCGGCTAGTAGTAGGAGTATCAGCAATGCTCATGATGACAAGAAAAACCAGACTTCAAGATCAGATACACCCCCTCTTTTGTGGCCACGGCATGATGAAACAACAAGGAGGTTTAATCTTAATGATGCTGGTGCACCTGTTCAACAGTCATTTGGCGATCTAAACTTCCCTAGAATGGCTCCAGTATCTGTCCAGCGAGATGATGGTCAAGATGAAAACATGGTAGTTCTTCCCTGTATGAAATCAATGACATGGGTAATGGAAAATAGAAGCTCAACTCCGGGGAATAAAGTAGCTGTTATCAATCTGAAGTTACAAGATTATACCAAGGTTCCATCAGCAGAAACGGAGGTTAAGTTTCAGCTCTCTAGAGTTTCTTTGGAACCAATGTTGAAGTCTATGGCCGGCATCAGTGAACAACTTTCTACACCAGCTAATAAGGTTGCTGTAATAAATCTGAAGCTTCAAGACTCCGACACAATTTCTGGCGAGTCTGAAGTCAAGTTTCAGGTTTCCAGGGACACATTGGGTGCTATGCAACGATCAATGTCCTATATCCGTGAGCAACTTTCTTCTGATGGCTATGTGCAGTCAGATCCTATCTCTGTAACGAAAAGGCAGAAGAAGTGA 2766 0.4143 MSKWYLNMGERSGHLSATDDGAAEPSDGEVNNAENSGSHVEDGASEPHLGMGFESEDAAKNFYNEYARRLGFTPKASPQSRSKPDGANAYREFVCGGDGLKRKPNETCNAMIRIERKGQHKWFVTKFVKEHSHSTSSSGEVHSLQPRRHFSSVGRTMPETYQGVGLVPSGVMYISMDRAPGNRNSTENIHGSRNFPAVGAKTNHQVSAVATKTNHQVPAVAAKTNHQVPAVVAKTNHQIKNSTSINYTVKQPVQKKTLGRDCQNLLEYFKRMQAENPGFFYAIQLDEDNHMSNVFWADARSRSAYNHFGDAISLDTTFKVYQYKVPFVPFTGVNHHGQTILFGSALLLDDSEDSFVWLLKTFLTAMNDRHPISITTGQDRAIQSAVSQVFPHARHCLNKWDVLREGQERLAHVCHMHPNFQGELYNCINLTETIEEFDSSWNSIMEKYELGRNEWLQSLYNARAQWVPAYFRDSFFAAISPNHGFDSSFFDGFVNPQTTLPIFFRQYEQAMEMWFEREIELDSETICSQPVLKTPSPMEKQTANLYTRKVFSKFQEELVETFVYTANRIEEEGANSIFRVAKFEDDQKAYIVTLNHSELKADCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKSYVGLDEHASESHGLDSMTSRYGTLCREAIKYAEDGAISVETYSAAMGALRDVGKKVAVAKRNFAKVAPASSRSISNAHDDKKNQTSRSDTPPLLWPRHDETTRRFNLNDAGAPVQQSFGDLNFPRMAPVSVQRDDGQDENMVVLPCMKSMTWVMENRSSTPGNKVAVINLKLQDYTKVPSAETEVKFQLSRVSLEPMLKSMAGISEQLSTPANKVAVINLKLQDSDTISGESEVKFQVSRDTLGAMQRSMSYIREQLSSDGYVQSDPISVTKRQKK* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0650 921 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 34 167 - -
Ahy17g0650 921 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 192 846 - -
Ahy17g0650 921 Pfam FAR1 DNA-binding domain 61 134 IPR004330 -
Ahy17g0650 921 SMART 26again6 601 628 IPR006564 GO:0008270
Ahy17g0650 921 MobiDBLite consensus disorder prediction 1 52 - -
Ahy17g0650 921 ProSiteProfiles Zinc finger SWIM-type profile. 590 626 IPR007527 GO:0008270
Ahy17g0650 921 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 167 IPR031052 GO:0006355
Ahy17g0650 921 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 192 846 IPR031052 GO:0006355
Ahy17g0650 921 MobiDBLite consensus disorder prediction 714 742 - -
Ahy17g0650 921 Pfam SWIM zinc finger 590 624 IPR007527 GO:0008270
Ahy17g0650 921 Pfam MULE transposase domain 312 402 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0650 Ahy-Chr17 6709485 6714770 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g0650 MULE 3.00E-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0650 - - aip:107608865 1851.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0650 17 6709485 6714770 Ahy7g0506 7 4981347 4986469 hybridization
Ahy17g0062 17 803088 807221 Ahy17g0650 17 6709485 6714770 PCT
Ahy17g0650 17 6709485 6714770 Ahy17g0062 17 803088 807221 PCT