Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0644 ATGGAAAACAAAGTAGCAAGAACAAGTGAAGCTCAACCCATAAGATGTAAAGCTGCGGTTAGTCGCAAACAAGGTGAGGCATTGAGCATTGAAGAGATCATTGTGGCACCACCAATGGCTTGTGAAGCAAGGATTAAAGTTATATGCACCACTCTTTGTCACGTTGATCTCACTTTTTGGAACACTAAGGACCCTGCTTCAATTTGGCCAAGAATTCTGGGTCATGAGGCAATTGGGGTTGTGGAAAGCATAGGAGAGAATGTAACTGAAGTTGCAAAAGGAGATGTAGTTATGACAATATTCTTGCCAGATTGTGGAGAGTGTGTGGATTGCAAATCAGAAAAGAGCAACCTGTGTTCAAAATTCCCATTCAAAGTATCTCCATGGATGCCAAGATATGATAGTAGCAGATTCACTGATCTCAATGGAGACATCATACACCATTTCCTTTTTGTTTCAAGTTTTAGTGAATACACTGTCGTTGACATTGCCAATCTAACCAAGATTCATCCCCTTGTTCCTCCAAACAAGGCATGCCTCCTTAGTTGTGGTATCTCGGCCGGGCTAGGTGCTGCTTGGAGATTAGCAAATGTAGAGCCAGGTTCAACTGTTGCTATTTTTGGGTTGGGAAGCATTGGATTAGCAGTTGCTGAAGGAGCTAGATTTTGTGGAGCAACTAGAATTATTGGTGTGGATGTTAAGCCAGAAAAATTTGAAATTGCAAAAAAGTTTGGAGTTACTGATTTTGTTAATGCTGGAGAATGTGGAGACAAATCTCTAAGCCAGATAATTATAGATATGACTGGTGGTGGAGCAGATTACTGCTTTGAATGTGTTGGTTTAACATCATCAGTTCATGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAACAATTGTTTTAGGAGTGGACAAGCCAGAATCCAAGTTGAGTCTTAACACTAGAGAGATCCTCTTCAATGGGAAGAGCCTAATTGGATGCTTATTTGGAGGACTCAAACCCAAATCTCATGTCCCTGTTCTCCTTAAACGTTACATGGACAAGGAACTAAAGTTGGATGAATTTGTCACTCATGAGTTGAAATTCAAAGACATCAACAAAGCTTTTGATTTACTGATGAAAGGAGAGTGTCTGAGATGTGTAGTTTGGATGGACAAATGA 1164 0.4038 MENKVARTSEAQPIRCKAAVSRKQGEALSIEEIIVAPPMACEARIKVICTTLCHVDLTFWNTKDPASIWPRILGHEAIGVVESIGENVTEVAKGDVVMTIFLPDCGECVDCKSEKSNLCSKFPFKVSPWMPRYDSSRFTDLNGDIIHHFLFVSSFSEYTVVDIANLTKIHPLVPPNKACLLSCGISAGLGAAWRLANVEPGSTVAIFGLGSIGLAVAEGARFCGATRIIGVDVKPEKFEIAKKFGVTDFVNAGECGDKSLSQIIIDMTGGGADYCFECVGLTSSVHEAYASCRKGWGKTIVLGVDKPESKLSLNTREILFNGKSLIGCLFGGLKPKSHVPVLLKRYMDKELKLDEFVTHELKFKDINKAFDLLMKGECLRCVVWMDK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0644 387 Gene3D - 19 380 - -
Ahy17g0644 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Ahy17g0644 387 Gene3D - 188 328 - -
Ahy17g0644 387 PANTHER ALCOHOL DEHYDROGENASE 10 384 - -
Ahy17g0644 387 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 10 384 - -
Ahy17g0644 387 SUPERFAMILY GroES-like 10 194 IPR011032 -
Ahy17g0644 387 SUPERFAMILY GroES-like 336 384 IPR011032 -
Ahy17g0644 387 Pfam Zinc-binding dehydrogenase 212 332 IPR013149 -
Ahy17g0644 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 348 IPR036291 -
Ahy17g0644 387 Pfam Alcohol dehydrogenase GroES-like domain 42 168 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0644 Ahy-Chr17 6684277 6687219 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0644 42 334 Monolignol Biosynthesis Gene Families AT4G37990 24.324 1.82e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0644 K00121 - gmx:100788587 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0644 17 6684277 6687219 Ahy7g0501 7 4952400 4955376 hybridization