Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0642 ATGGAAGAGAAAGCAGCAAGAACAATTGAAGGTCAACCCATAAGATGTAAAGCGGCGGTTGGAAGAGAACCAGGGGAGCCATTGATCATTGAAGAGATTATTGTGGCGCCTCCAATGGCTCGTGAAGCAAGGATTAAAGTTATATGCTCTTCTCTTTGTTACAGCGATGTCACTTTTTGGAAGATCAAGGACCCCCCTGCAATTTGGCCAAGAATTTTCGGTCATGAGGCAATTGGGATTGTGGAGAGTGTAGGAGAGGATGTGACTGAAGTTACAAAAGGAGACATGGTTGTTCCAATTTTCTTGCCAGATTGTGGAGAGTGTGTGGATTGCAAATCAGAAAAGAGCAACCTGTGTTCAAAATTCCCATTCAAAGTATCTCCATGGATGCCAAGATATGATAGTAGCAGATTCACTGATCTCAATGGACACATCATACACCATTTCCTTTTTGTTTCAAGTTTTACTGAGTACACTGTTGTTGACATTGCCAATCTAACCAAGATTCATCCACTTGTTCCTCCAAACAAAGCATGCCTCCTCAGTTGCGGCGTATCGACCGGGGTAGGAGCTGCTTGGAAAGCAGCAAAAGTGGAACCAGGATCAAGTGTAGCTATTTTTGGACTAGGAAGCATTGGATTAGCGGTTGCTGAAGGAGCTAGACTTTGTGGAGCAACTAAGATTATAGGTGTAGATGTCAACCCAGATAAGTTTGAAATTGGAAAAAAGTTTGGAGTCACTGACTTTATTCAAGCTGGAGGAGACAAATCTGTGAGCCAGGTTATTATAGAGATGACTAGTGGAGGTGCAGACTATTGCTTTGAATGTGTTGGAAGGGCATCATTGGTCCATGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGGAAAACAGTTGTTTTAGGAGTGGACAAGCCAGGATCTTGTTTGACGCTTAACTCTACTGAAGTCCTTTGTGATGGGAAGAGTCTCATAGGAGCCTTGTTTGGGGGACTCAAACCCAAGTCTCATGTCCCTATTCTCCTTAAGCGCTACATGGACAAGGAACTGAATTTGGATGAGTTTATAACACATGAAGTGGACTTTAAGGACATCAATAAAGCATTCGATTTGCTGCTTAAAGGGGAGTGTCTCCGATGTGTGATTTGGATGGATAAATAA 1158 0.4283 MEEKAARTIEGQPIRCKAAVGREPGEPLIIEEIIVAPPMAREARIKVICSSLCYSDVTFWKIKDPPAIWPRIFGHEAIGIVESVGEDVTEVTKGDMVVPIFLPDCGECVDCKSEKSNLCSKFPFKVSPWMPRYDSSRFTDLNGHIIHHFLFVSSFTEYTVVDIANLTKIHPLVPPNKACLLSCGVSTGVGAAWKAAKVEPGSSVAIFGLGSIGLAVAEGARLCGATKIIGVDVNPDKFEIGKKFGVTDFIQAGGDKSVSQVIIEMTSGGADYCFECVGRASLVHEAYASCRKGWGKTVVLGVDKPGSCLTLNSTEVLCDGKSLIGALFGGLKPKSHVPILLKRYMDKELNLDEFITHEVDFKDINKAFDLLLKGECLRCVIWMDK* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0642 385 SUPERFAMILY GroES-like 334 382 IPR011032 -
Ahy17g0642 385 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Ahy17g0642 385 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Ahy17g0642 385 PANTHER ALCOHOL DEHYDROGENASE 9 382 - -
Ahy17g0642 385 Pfam Zinc-binding dehydrogenase 212 330 IPR013149 -
Ahy17g0642 385 SUPERFAMILY GroES-like 10 199 IPR011032 -
Ahy17g0642 385 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 9 382 - -
Ahy17g0642 385 Gene3D - 188 326 - -
Ahy17g0642 385 Gene3D - 19 378 - -
Ahy17g0642 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 346 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0642 Ahy-Chr17 6669487 6674654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0642 41 186 Monolignol Biosynthesis Gene Families AT4G37970 29.333 2.03e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0642 K00121 - gmx:100806887 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0642 17 6669487 6674654 Ahy7g0499 7 4937210 4941680 hybridization