Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0627 ATGTTTCCTTTTTCTGATTTGCTGAATATGATCGAAGATTATGATTTTTTAGTTGATGTTATTGGTCTTTTAACTTCAGTGGGAGAAGAGAAAGAATATGCAAAAGAGGGCAAAATTGTGAAAATGATTGTGCTGGAATTAACTTCCAAAGATCTTACCTTGCGATGTGCATTGTTTGGGGACTATGTTAATCAAGTAAATCATTTTCTTGCGTCTGGCTATGTGGAGCAGCCTGTTGTAGTCATTCAACTTGCAAAAGTCAAGTTCTTTAGGGGTCAAGTAGGCCTTCAAAATGTGATGTATGCCACTCAAATGTTATTTAATCCTGATCTTCCTGAGGTTGTTGAGTTCAGGCAGAGTATGATTGAGCAAGGGGTGAATGGTACTCAGCCACTGTTTATTGAAAATGAGGGTAAAGTTGTGTCGTTAGAAGATGATTTCATGCGTTTAACTAGAAAATGCACAATTGAAGAGCTTCAAGATAAGAATCAGGAGGGTTCTTTTATCATCTTTGGTACAATCCAAGGTATTGTTGAGGATGGAGGTTGGTGGTATTCTGCTTGTGTGTGTGGAAAGGGTATCTATCCTCAGAATGGTGCATATTACTGTGATTTCTGTTTGAAGCACATAACCAATGTCACTCCAAGGTCAGAAATTTTGTTGAAAGTGTATTTTTATTTTGTCTTCTAG 690 0.3725 MFPFSDLLNMIEDYDFLVDVIGLLTSVGEEKEYAKEGKIVKMIVLELTSKDLTLRCALFGDYVNQVNHFLASGYVEQPVVVIQLAKVKFFRGQVGLQNVMYATQMLFNPDLPEVVEFRQSMIEQGVNGTQPLFIENEGKVVSLEDDFMRLTRKCTIEELQDKNQEGSFIIFGTIQGIVEDGGWWYSACVCGKGIYPQNGAYYCDFCLKHITNVTPRSEILLKVYFYFVF* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0627 229 SUPERFAMILY Nucleic acid-binding proteins 2 121 IPR012340 -
Ahy17g0627 229 CDD RPA1_DBD_B_like 19 122 - -
Ahy17g0627 229 PANTHER REPLICATION FACTOR A 1, RFA1 2 221 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy17g0627 229 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 2 221 - -
Ahy17g0627 229 Gene3D - 142 224 IPR012340 -
Ahy17g0627 229 Gene3D - 1 130 IPR012340 -
Ahy17g0627 229 SUPERFAMILY Nucleic acid-binding proteins 153 221 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0627 Ahy-Chr17 6435098 6438233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0627 3 206 Core DNA Replication Machinery Family AT2G06510 23.744 8.13e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0627 - - adu:110280586 419.468