Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0602 ATGTCGATTGCAGGGCAACTGAACGTGAACGAATCCCATTCTTGGGGATCCAGAAGTGTGGATTGCTTCGAGAAGTTGGAGCAAATTGGCGAGGGCACATACGGTCAAGTTTACATGGCTAAAGAGATCAAAACTGGTGAAATTGATGCTCTGAAGAAAATTCGAATGGACAATGAGAGAGAAGGGTTTCCTATAACTGCTATACGAGAAATCAAAATTCTTAAGAAACTACACCATGAAAATGTGATCAAGCTAAAAGAAATTGTCACTTCTCCAGGCCCTGAGAAAGATGAACAAGGGAGGCCAGATGGTAACAAATATAAAGGGGGCGTCTATATGGTCTTCGAATACATGGACCATGATTTGACTGGTCTTGCTGACTGTCCTGGGATGAGATTCACAGTTCCCCAAATTAAGTGTTACATGAGACAGCTGTTGACGGGGCTTCATTATTGTCATGTAAATCAAGTACTTCATCGAGATATTAAAGGCTCAAATCTCCTTATGGACAATGAAGGAAATCTGAAGCTTGCAGATTTCGGACTGGCATGGTCATTTTCTAATGATCACAATGCAAATCTTACAAACCGTGTCATTACATTATGGTACAAAGAACCTGAGTTGCTGCTAGGGACAACAAAGTATGGGCCAGCTGTAGATATGTGGTCTGTTGGGTGCTTTTTTGCCGAACTTCTTCATGGGAAGCCTATCTTTCCTGGAAAAGATGAGCCTGAACAACTAAATAAAATATTTGAGCTGTGTGGAGCACCGGATGAGGTGAACTGGCCTGGGGTTTCCAAGACTCCTTGGTATAATCAATTTAAACCAACAAGGCCAATGAAAAGACGTTTGAGGGAAGTTTTCAGACATACCATAAACCTACATGGGAAGTCGGGGCTCCAATTAATTTCGCTGTTGCAAGAAAATGTCTCTGAAAACCAAGAACAACTGCTGGATCTTGGACTCGGAGAGCTGAATCTCCTGTCGGGGTGTTCCATCCTTAGAGAGCGAGACCAAGAGCAGCACTTTGGGATCAGTGTAATCGGACCCCAATATAAAAGAACAAAAGAAATAGAAAACAATTAG 1086 0.4227 MSIAGQLNVNESHSWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIDALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPDGNKYKGGVYMVFEYMDHDLTGLADCPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLMDNEGNLKLADFGLAWSFSNDHNANLTNRVITLWYKEPELLLGTTKYGPAVDMWSVGCFFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPTRPMKRRLREVFRHTINLHGKSGLQLISLLQENVSENQEQLLDLGLGELNLLSGCSILRERDQEQHFGISVIGPQYKRTKEIENN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0602 361 Gene3D Phosphorylase Kinase; domain 1 9 119 - -
Ahy17g0602 361 Pfam Protein kinase domain 23 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0602 361 CDD STKc_CDK9_like 23 306 - -
Ahy17g0602 361 PANTHER CYCLIN-DEPENDENT KINASE C-2 8 291 - -
Ahy17g0602 361 SUPERFAMILY Protein kinase-like (PK-like) 16 284 IPR011009 -
Ahy17g0602 361 PANTHER CELL DIVISION PROTEIN KINASE 8 291 - -
Ahy17g0602 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Ahy17g0602 361 ProSiteProfiles Protein kinase domain profile. 23 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0602 361 SMART serkin_6 23 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0602 361 Gene3D Transferase(Phosphotransferase) domain 1 120 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0602 Ahy-Chr17 5997292 6008185 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0602 1 290 Core Cell Cycle Gene Families AT5G10270 84.192 0.0 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy17g0602 Pkinase 1.50E-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0602 K08819 - gmx:100793565 577.015