Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0587 ATGTCTGCTCTTCTCACCAACGATCTTAACGATCTTTCCCTCAAGCCCCAGATTCAGAGTGAAACAGGAAGTGAATGTGAAGGGGAGATTCGTGGGGTGGAAGGAGGTGGCGGGAACCATGTTCATCGTGAAGGTCTGTGCGCCATTTGCTTGGACAAGATTCTGCTTCAGGATACTGCTCTTGTAAAAGGTTGCGAGCATGCATACTGCGTGACGTGCATCCTTCGCTGGGCTACTTACAGAGAGAGAGTTACCTGCCCTCAGTGTAAACATCCATTCGACTTCCTCTTTGTCCATCGCTCGCTTGATGGCAGCATCCAGGACTACATGTTCGAGGAGAGTGTTTGCCTACTACTTAGGGCTGCATGGTTTCAACCTCTGAAGGTCGAAAATCACGTGGAGCATGAAGATGCCTACGATCCTATTGAAGATTTTTATCAATATCGATATGATTATGAGTATGATGACGAGGATGATGATGATCTAGATGAAGTTTACTATGGTAGCTCATCAAGTCTTCGCATTGGTAACCGGAGATGGGGAGACAATGGTTATGTCAGATCTGGGCGGCTCGAAGCAAGGCCAGTCCCGCGATCAAACTTCCAGGATCTAGGAGGCGCAAGTTCATCATCTCGCCAGCCAAAAAAGAAAGAGGCAGCTGAAAAAGTCGCAACAGGTAGACGGGCTAAGAGGGCATTGAAGCGGGAGGCTGCTGATAAGGCTGCAGCGGCAAAGCATCAGCAGCATCTAGTGAGGTTGGGCAGGAAGTAG 771 0.4903 MSALLTNDLNDLSLKPQIQSETGSECEGEIRGVEGGGGNHVHREGLCAICLDKILLQDTALVKGCEHAYCVTCILRWATYRERVTCPQCKHPFDFLFVHRSLDGSIQDYMFEESVCLLLRAAWFQPLKVENHVEHEDAYDPIEDFYQYRYDYEYDDEDDDDLDEVYYGSSSSLRIGNRRWGDNGYVRSGRLEARPVPRSNFQDLGGASSSSRQPKKKEAAEKVATGRRAKRALKREAADKAAAAKHQQHLVRLGRK* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0587 256 SMART ring_2 47 89 IPR001841 -
Ahy17g0587 256 ProSiteProfiles Zinc finger RING-type profile. 47 90 IPR001841 -
Ahy17g0587 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 113 IPR013083 -
Ahy17g0587 256 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 256 - -
Ahy17g0587 256 MobiDBLite consensus disorder prediction 214 246 - -
Ahy17g0587 256 SUPERFAMILY RING/U-box 43 97 - -
Ahy17g0587 256 Pfam Ring finger domain 47 90 IPR001841 -
Ahy17g0587 256 ProSitePatterns Zinc finger RING-type signature. 65 74 IPR017907 -
Ahy17g0587 256 MobiDBLite consensus disorder prediction 196 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0587 Ahy-Chr17 5728081 5730574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0587 5 256 C3H Transcription Factor Family AT5G19430 55.598 5.40e-79 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0587 - - gmx:100777135 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0587 17 5728081 5730574 Ahy17g0587 17 5728081 5730574 ECH