Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0557 ATGATGAACAACAACAGCACTATTCCTGGTTGGAACTTTGAGAGTGATGCCTGTGTCATCAATCAAAAGAGTCCAATAGGGCTGGACCAAGATCTTGTAGAGCTTCTATGGAAAAATGGGCAAGTAGTATTGAGCAGCCAAACACAAAGGAAACCAGTTCAGAAAAGTGATGCATCATCAACATTAAGGAATGGTGTTCATTGTGGAAACTCAAGTAGTAATTTGAGTCAACAAGAAGATGAGACAGCTTCATGGATTCAATACCAAGTTGAGGATCATCCAATGGGACAAGAACTTTGCTCATCAAATCTTTTATCTCAATTGACACCTTGTGAAGTTGAGGCTTACAAGCCAATCAAGCAATTGGAAGAACCAAAGTTTGCAAAATTTGCTACCCCAAATGCAAATTTAAGTCCACAACAACAAAACAACAATATAAAACCAATAAATCCTATGCCCGCTCCAAGATTCCAGGTTGCTCCTGATTCATCTAATCAGAAAACCAATGACTTTGTTGGTGGATCATCATCATCACAAAAGGTTCCAAAGTTTTCTCATCATTTTTCAGCACCCGCACAACAAAAGTTTAGGGAGAAAGTTAATGGTAACAATAATGTGCTACAAAGTGAGGGTAGGGAGTGTTCAGTTATGACAGTTGGATCAAGTCACTGTGGCAGCAACAACATCATCCCTCAGGAACAAGATACTACTTTCTCTGAAGCAGTTAAAGATTGTGTTCAGAGAAGTGTTCCTAATTGGAGTAACAATAAGGGGAAATCTTCAGAGATGATTGAGGCAACTGTGACTTCATCTTCTGGTGGCTCAGGTAGTAGTCTTGGAAAAACTACTTGTTCTTTATCAACAGGAAATCATCTTAGCCTAAAGAGGAAAATCACAGATGCAGATGAATCAGAAGAACAAAGTGAGGCCACAGAGCCTAAATCAGGTGTTGGAAACAAAACATCTCAGAGATCAGGATCTTCTAGAAGAAACCGTGCAGCAGAAGTGCATAACCTATCTGAAAGGAGAAGAAGAGACAGGATCAATGAGAAAATGAGAACACTCCAACAACTCATACCAAACAGTAATAAGACAGACAAAGCATCAATGCTAGAAGAGGCAATTGAATACTTGAAGTCACTTCAGTTACAGCTTCAGGTAATGTGGATGGGAGCAGGGATGACACCAGTGATGTTTCCTGGGATTCAGCATTACATGTCACAAATGAGTGCAATGGGAATGGCTGCAGCATCACAACCTTCTCTTTCTTCTATGCAAAATCCAATGCAAATACCAAGAATGCCCCTTGACCAATCCAACATGCCTTCTACTGTGTCTGTGCCTCATCATCAAACACCTTCAAACCAGGCTTTGATGTGCCAAAATCCAGTTTTGGGTGCATTTAATTACCAAAATCATCAGATGCAAAATCCATGCCTTGCAGACCAATATGCACGTTACATGGCCTATCATCATCTCATGCAAACTGCATCTCAGCCAATCAATGTATTTGGACATGGTTCCCAGGCTGTTCAGCAGAGTCAAACAATGATGCCACCCAGCAATAACAATGGGACCATGAATGTTGCACCTAATTTTGAAGATGCTATCACTGCCAAAATGGGTACTTCCACCTTTCAACAACTCAACAATAACTAA 1659 0.4045 MMNNNSTIPGWNFESDACVINQKSPIGLDQDLVELLWKNGQVVLSSQTQRKPVQKSDASSTLRNGVHCGNSSSNLSQQEDETASWIQYQVEDHPMGQELCSSNLLSQLTPCEVEAYKPIKQLEEPKFAKFATPNANLSPQQQNNNIKPINPMPAPRFQVAPDSSNQKTNDFVGGSSSSQKVPKFSHHFSAPAQQKFREKVNGNNNVLQSEGRECSVMTVGSSHCGSNNIIPQEQDTTFSEAVKDCVQRSVPNWSNNKGKSSEMIEATVTSSSGGSGSSLGKTTCSLSTGNHLSLKRKITDADESEEQSEATEPKSGVGNKTSQRSGSSRRNRAAEVHNLSERRRRDRINEKMRTLQQLIPNSNKTDKASMLEEAIEYLKSLQLQLQVMWMGAGMTPVMFPGIQHYMSQMSAMGMAAASQPSLSSMQNPMQIPRMPLDQSNMPSTVSVPHHQTPSNQALMCQNPVLGAFNYQNHQMQNPCLADQYARYMAYHHLMQTASQPINVFGHGSQAVQQSQTMMPPSNNNGTMNVAPNFEDAITAKMGTSTFQQLNNN* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0557 552 Gene3D - 327 388 IPR036638 GO:0046983
Ahy17g0557 552 MobiDBLite consensus disorder prediction 250 286 - -
Ahy17g0557 552 CDD bHLH_AtPIF_like 332 395 - -
Ahy17g0557 552 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 332 381 IPR011598 GO:0046983
Ahy17g0557 552 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 329 395 IPR036638 GO:0046983
Ahy17g0557 552 Pfam Helix-loop-helix DNA-binding domain 336 382 IPR011598 GO:0046983
Ahy17g0557 552 MobiDBLite consensus disorder prediction 330 346 - -
Ahy17g0557 552 MobiDBLite consensus disorder prediction 298 346 - -
Ahy17g0557 552 SMART finulus 338 387 IPR011598 GO:0046983
Ahy17g0557 552 MobiDBLite consensus disorder prediction 162 181 - -
Ahy17g0557 552 MobiDBLite consensus disorder prediction 46 80 - -
Ahy17g0557 552 MobiDBLite consensus disorder prediction 311 329 - -
Ahy17g0557 552 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 8 524 IPR031066 -
Ahy17g0557 552 PANTHER TRANSCRIPTION FACTOR PIF5 8 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0557 Ahy-Chr17 5377786 5385380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0557 10 526 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G43010 34.457 2.26e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy17g0557 HLH 6.20E-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0557 K16189 - gmx:100811777 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0557 17 5377786 5385380 Ahy17g0557 17 5377786 5385380 ECH
Ahy17g0557 17 5377786 5385380 Ahy7g0394 7 3378382 3385865 hybridization
Ahy17g0557 17 5377786 5385380 Ahy17g0557 17 5377786 5385380 PCT
Ahy17g0557 17 5377786 5385380 Ahy7g0394 7 3378382 3385865 PCT
Ahy7g0394 7 3378382 3385865 Ahy17g0557 17 5377786 5385380 PCT
Ahy17g0539 17 5222517 5226190 Ahy17g0557 17 5377786 5385380 PCT
Ahy7g0378 7 3228003 3231831 Ahy17g0557 17 5377786 5385380 PCT