Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0549 ATGAGAAATTGGGAGAAAATTGGAGTAAGACAATACAATAAATCAGAGCTTCCAAGGTTGAGATGGACACCTGAACTCCATGAACAATTTGTTGAAGCTGTTGAAAGCCTTGGTGGAAAACACAAGGCAACTCCAAAGCAAATTTTGCAGCAGATGGCAGTGAAAGGATTAAGAATTGCTCACATCAAAAGCCATCTTCAGATGTACAGAAATCTGAAGGGACATGCTTCCCTCTCAGTGGATCACTTGATGGAAGAATATCAACATGTTAAGGATCTCAAAATCACCTCCATTCCTTCACCAAAAAGATCATCGATAGTGACCAACTTAAGAGGTTCAAATTATGAAAGGAGGATTCCCATGGAAGACCTTCATCTATCAAACGGCGTTTCACAAATCAGTGAAGAAACTGATTATGATCTAAACCAGGAAGCTGAATCAAGTGGAGGCTTATTAACTTGTGACGATGAATTAAACGAAGAAGAAAATAATAATAATAATAACAGTAATAGTAGTAGAGTTATTCATCAATTTATTCCTGGTGTCTCATTCTCTTTTAACACTAGTACTGGGCCTCTAAAATTGATGATGCATAATAGTGAGAGTGGAAAACAAGACATAATGCATTTTACGACGACGACGACGACGACGACGACGACGACGACAACAGCAACAACTGCAGTTGATTCTGTTAATTCTAGTATCTTTGTACCATCATCTACCCCAAACAATAATTATATAAATTTAGACCTAAGAATATGA 762 0.3727 MRNWEKIGVRQYNKSELPRLRWTPELHEQFVEAVESLGGKHKATPKQILQQMAVKGLRIAHIKSHLQMYRNLKGHASLSVDHLMEEYQHVKDLKITSIPSPKRSSIVTNLRGSNYERRIPMEDLHLSNGVSQISEETDYDLNQEAESSGGLLTCDDELNEEENNNNNNSNSSRVIHQFIPGVSFSFNTSTGPLKLMMHNSESGKQDIMHFTTTTTTTTTTTTTATTAVDSVNSSIFVPSSTPNNNYINLDLRI* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0549 253 SUPERFAMILY Homeodomain-like 18 71 IPR009057 -
Ahy17g0549 253 Gene3D - 17 73 - -
Ahy17g0549 253 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Ahy17g0549 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 5 211 IPR044848 GO:0003700
Ahy17g0549 253 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 18 71 IPR006447 GO:0003677
Ahy17g0549 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Ahy17g0549 253 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 5 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0549 Ahy-Chr17 5300232 5305608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0549 8 70 G2-like Transcription Factor Family AT1G14600 68.254 4.18e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy17g0549 Myb_DNA-binding 1.20E-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0549 - - aip:107608315 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0549 17 5300232 5305608 Ahy17g0549 17 5300232 5305608 ECH
Ahy17g0549 17 5300232 5305608 Ahy7g0386 7 3314129 3319014 hybridization