Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0547 ATGCGGATTCTCCCCGAGACCGCCGCGCTTTTGTCACAAAAGGTTCAATTCAAAACCCCTGAAAAGCCAAACGCGGTCTTAGCCCTCCTCAGACAATATGGATTCTCCGATACGCAGATCGCTAAGTTCATTCAGAAGCGACCGTTGTTCCTCCTCACTGATGCGGAAAAGATCATTAAGCCCAAGCTCATGTTTTTCTCCTCCATTGGGATTCCACGTGTTCTCCTCCCAAAACTTGTGATTGAGAACCAAAACCTGTTAGCGAGGAGCTTGGAGAAGTGCCTCATTCCGCGCTATGAGGTCCTGAAGAGTGTTGTTCGAAGTGAGCAAGAAATTGTTTGTTCATTGAAGCGCGGTGCAATGGCTTTTGTGTTGTGTGATGTGATGAAGAATTTGATTCCCAACACAAAGGTTTTGAGAGATTTGGGTGTGCCTCAGAGTTCAATCTCACTGTTGGTTATGTTTCACCCGAGCGAGGCGTTTATGAATCATGAGAGGTTTGCTAAATGTGCGAAGTTGGCAAAGGAAATGGGGTTTGATCCTAACAAGTGCAATTTCATCAGTGCCGTACATGTGCTCTCGCATATGGATTGCGCCAAGATGGACCGAAAAATGAAGTCTTTGGAGAAATGGGGTTGGTCAAAAGAGGTGTCCCTTTCGTCGTTTAGAAAGTTCCCTACTTTTATGTCATATTCGCCGGAGAGGATCGAGCGGGCGATGAGATTCTTGGTGGAGGATATGGGTTGGTCTTCCGAGGACATTGCGAGGTTCCCCACAACTCTAGGATACAGCTTGGAGAAGAGGGTTATCCCTAGATGCCATGTGATTAAGGTCTTGAAATCGAAACGACTCGTCAAAGATCAGTTATGCTTGGCGACATTCATGTGTATGAAGGAGGAAGAGTTTTTGGAGGACTTTGTGACTAAGTATCTGGATCAGGTGCCTCTTCTACCTAAGGTATATCAAGGTTTGGTTGATTATAAGGATTTACTTTAG 996 0.4558 MRILPETAALLSQKVQFKTPEKPNAVLALLRQYGFSDTQIAKFIQKRPLFLLTDAEKIIKPKLMFFSSIGIPRVLLPKLVIENQNLLARSLEKCLIPRYEVLKSVVRSEQEIVCSLKRGAMAFVLCDVMKNLIPNTKVLRDLGVPQSSISLLVMFHPSEAFMNHERFAKCAKLAKEMGFDPNKCNFISAVHVLSHMDCAKMDRKMKSLEKWGWSKEVSLSSFRKFPTFMSYSPERIERAMRFLVEDMGWSSEDIARFPTTLGYSLEKRVIPRCHVIKVLKSKRLVKDQLCLATFMCMKEEEFLEDFVTKYLDQVPLLPKVYQGLVDYKDLL* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0547 331 Gene3D Transcription termination factor 3, mitochondrial 108 314 IPR038538 -
Ahy17g0547 331 PANTHER CGI-12 PROTEIN-RELATED 5 324 IPR003690 GO:0003690|GO:0006355
Ahy17g0547 331 SMART mt_12 41 72 IPR003690 GO:0003690|GO:0006355
Ahy17g0547 331 SMART mt_12 251 285 IPR003690 GO:0003690|GO:0006355
Ahy17g0547 331 SMART mt_12 219 250 IPR003690 GO:0003690|GO:0006355
Ahy17g0547 331 SMART mt_12 120 145 IPR003690 GO:0003690|GO:0006355
Ahy17g0547 331 SMART mt_12 77 108 IPR003690 GO:0003690|GO:0006355
Ahy17g0547 331 SMART mt_12 184 214 IPR003690 GO:0003690|GO:0006355
Ahy17g0547 331 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 5 324 - -
Ahy17g0547 331 Pfam mTERF 27 181 IPR003690 GO:0003690|GO:0006355
Ahy17g0547 331 Pfam mTERF 197 303 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0547 Ahy-Chr17 5286913 5288547 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy17g0547 mTERF 7.40E-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0547 K15032 - gmx:100786641 307.375