Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0544 ATGATTCAAGTGGAACCTGGTGTAGTTGGGGTTATGGACAGTGCAAATGAAGCATCATCATCTTTAAGCTTTGTATCATCTCATTTATCAAATGGTGGTTCAAGCAATAACAATGAGAATAGTGGTGGGGGTATTGAGATTTTGAGCTTGAAGAAGCTAAGCACTAGCCTTGAGAAGTTGATGATTGATGCTGATTATGATTATAGTGATGCTGAGATTCTTGTTGAAGGTATCCCTGTGAGTGTTCATAGGTGTGTATTGGCTTCAAGAAGTCCTTTCTTTCATGAACTTTTCAAGAAAGGGAATGTTAGTAATGGCGAGGGTTCGGTTAAGGAAGGAGGAAAACCAAGGTATCTTATGTCTGAATTGGTGCCTTATGGGAAAGTTGGGCATGAATCCTTCCTTGTTTTCTTGCATTATTTATATACAGGGACCCTTAAGGCTTCACCACCAGAAGTAACAACATGTGTTGATGAAACATGTGTCCACGACGCTTGTCGCCCTGCAATCGATTATGCTTTGGAGCTCATGTATGCCTCTGCCACTTTTCAGATGAAAGAGCTTGTTTTGCTTTTTCAGCGGCGCCTTCTAAACTTTGTGGAGAAAGCTGTAGTGGAAGATGTGATTCCTGTTCTTATGGCAGCCTTCCACTGTCAACTAAGCCAGCTTCGCTTGCAATGCACTCAAAGAGTAGCAAGGTCTGATCTTGACACCACATCTTTGGAAAAGGAGTTCCCTCAGGAAGTTGTGGACGAAATCAAGTCGCTGCGAGCACAATCTGTGCTGGAATCCACACCTGAAGAAATGGAAGTGGAGACTTTGAATGAAAAGAGTATCAGGAGAATCCATAAGGCAATGGACTCGGATGATGTCGAGCTACTTAAGCTTCTTTTGAATGAGTCTAAGGTCACTCTAAATGATGCTTATGCACTTCACTATGCATGTGCCTATAGTGATTCTAAGGTTATTCAAGAGGTTCTTAATCTAGGCTTGGCTGATATTAACCTTAGAAATCCCCGAGGATATACAGTTCTTCATGTCGCTGCAAGGCGAAAGGATCCATCCATTTTGGTAGCACTGCTGAAGAAAGGGGCCAATGCATCAGATACTACTCCTGATGGACAAACAGCTCTTGTGATTTGTCAGAGGTTGACGCGGCGCAAGGATTATCATGAGGAAACCGTGCAGTGCAAGGAATCTAACAAAGACAGGCTCTGTGTTGATGTTCTTGAGCGAGAAATGAGAAGAAATTTCAAGTGTGTGACTATGTCTGATTCATCTGAGACAACTGCTGATGATTTGCATATGAAGCTGGATTACTTTGAAAATCGAGTTGCATTTGCTAGGTTGTTGTTTCCTGCTGAGGCTAGAGTTGCCATTGAGAATGCTGAGGTGGATTCAGCCTCGTTGGATACAACATCATCGGCTTTGAAGCGCGCAGGCGCTAATCGCGAAGTAGACCTGAATGAAACTCCGGCTGTTCGAACCAAAAAGATGCAACTAAGATTGCAATCCCTTCAGAAAACAGTTGAGAATGGTAGGCGCTTCTTTCCCCATTGCTCCGAGGTGCTTGACAATTTCTTGGAGGACCTCATACCAGATGTTTTCTTCCTAGAGAAGGGCTCAGAAGAAGAGCAGCGAATCAAGAAGGCGCGATTCATGGAGCTCAAAGACGATGTCCAGAAGGCGTTTCACATGGATATGGCCGAAAACAAACGCCATTCTGGCTTGTCATCGTCGATGTCTTCCTCTTCTTCGTCGTCTCGCAAGGAAGGTGTTGGCCATAGATTGAGGAAAAAGTGA 1803 0.4382 MIQVEPGVVGVMDSANEASSSLSFVSSHLSNGGSSNNNENSGGGIEILSLKKLSTSLEKLMIDADYDYSDAEILVEGIPVSVHRCVLASRSPFFHELFKKGNVSNGEGSVKEGGKPRYLMSELVPYGKVGHESFLVFLHYLYTGTLKASPPEVTTCVDETCVHDACRPAIDYALELMYASATFQMKELVLLFQRRLLNFVEKAVVEDVIPVLMAAFHCQLSQLRLQCTQRVARSDLDTTSLEKEFPQEVVDEIKSLRAQSVLESTPEEMEVETLNEKSIRRIHKAMDSDDVELLKLLLNESKVTLNDAYALHYACAYSDSKVIQEVLNLGLADINLRNPRGYTVLHVAARRKDPSILVALLKKGANASDTTPDGQTALVICQRLTRRKDYHEETVQCKESNKDRLCVDVLEREMRRNFKCVTMSDSSETTADDLHMKLDYFENRVAFARLLFPAEARVAIENAEVDSASLDTTSSALKRAGANREVDLNETPAVRTKKMQLRLQSLQKTVENGRRFFPHCSEVLDNFLEDLIPDVFFLEKGSEEEQRIKKARFMELKDDVQKAFHMDMAENKRHSGLSSSMSSSSSSSRKEGVGHRLRKK* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0544 600 Pfam Ankyrin repeats (many copies) 328 378 IPR002110 GO:0005515
Ahy17g0544 600 CDD BTB_POZ_NPR_plant 51 200 - -
Ahy17g0544 600 Pfam BTB/POZ domain 67 154 IPR000210 GO:0005515
Ahy17g0544 600 MobiDBLite consensus disorder prediction 567 600 - -
Ahy17g0544 600 MobiDBLite consensus disorder prediction 573 590 - -
Ahy17g0544 600 SMART BTB_4 69 200 IPR000210 GO:0005515
Ahy17g0544 600 SUPERFAMILY Ankyrin repeat 272 383 IPR036770 -
Ahy17g0544 600 ProSiteProfiles BTB domain profile. 69 150 IPR000210 GO:0005515
Ahy17g0544 600 Pfam NPR1/NIM1 like defence protein C terminal 382 584 IPR021094 -
Ahy17g0544 600 Gene3D - 239 483 IPR036770 -
Ahy17g0544 600 SUPERFAMILY POZ domain 65 198 IPR011333 -
Ahy17g0544 600 PANTHER REGULATORY PROTEIN NPR3 12 592 IPR044292 GO:0009862|GO:2000022|GO:2000031
Ahy17g0544 600 PANTHER REGULATORY PROTEIN, PUTATIVE-RELATED 12 592 - -
Ahy17g0544 600 ProSiteProfiles Ankyrin repeat region circular profile. 340 368 - -
Ahy17g0544 600 Gene3D Potassium Channel Kv1.1; Chain A 48 232 IPR011333 -
Ahy17g0544 600 SMART ANK_2a 340 369 IPR002110 GO:0005515
Ahy17g0544 600 SMART ANK_2a 306 336 IPR002110 GO:0005515
Ahy17g0544 600 SMART ANK_2a 277 305 IPR002110 GO:0005515
Ahy17g0544 600 Pfam Domain of unknown function (DUF3420) 235 283 IPR024228 -
Ahy17g0544 600 ProSiteProfiles Ankyrin repeat profile. 340 372 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0544 Ahy-Chr17 5269809 5273383 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Ahy17g0544 NPR1_like_C 1.10E-75 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0544 K14508 - gmx:100814739 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0544 17 5269809 5273383 Ahy7g0381 7 3278245 3281763 hybridization