Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0541 ATGGGTGGTAATAATGGAAGAGAAGAACTAGCGTTGAGGGTGAGTGTGACCAAGGAAGAGGTTGTTGCGGCGGTTTTGCCAATTCAAGACCATCGGTTACCGTTCTCAAACCTTGACCTCCTTCTTCCACCCGTTGACGTTGGTGTCTTCTTTTGCTACAACACAACACCACTCAGCTTTGGATCAATGGTGGAGTCCCTTAAGAATGCATTGGCTCAGGTTTTGGTTTCCTATTATGTATTTGCTGGTGAGGTGGTGCAAAACTCCATGGGTGAACCTGAGATTCTTTGCAATAACCGTGGGGTTGATTTTGTTGAGGCTGAGGCTGATGTTCACCTTCATCATCTTAACTTGTACAACCCTGATGAATCCATTGAAGGAAAGCTTGTTCCAAAGAAGAAGCATGGCGTCCTTGCTGTTCAGGTGACATCTTTAAAATGTGGCGGGATAATAGTGGCATGCACCTTCGATCATCGCATAGCAGACGCACACTCAGCAAACATGTTCCTAGTCTCATGGGCCGAGATAGCCCGCCCCATGAAGCCCACCACCGCAGCACAGCCGTGTTTTCGTCACTCCCTCCTCATCCCTCGACGCCCTCTTTGCATCCACCCTTCCCTGGACGCCATGTATGTTTCCCTTCCACCTCCATCTCAACTCGAACCCAATCATTTCAACTCACTCATAAGCCGGATATATTACACCACGGCTGATCAACTCAGCCACATGCAATCACTTGCAAGCTCATCGGATCCTATCAAGAACCGCACAAAGCTTGAATCTTTCACCGCGTTCTTGTGGAAGATGGTTGCCATGGCTACATCCTCCTCCTCTAGCGAGAAAAGGCTTGTTGCCAAGATGGGTGTGGTGGTTGATGGAAGGAAGAGGCTCAAAGAAGCTACGATGGATGATTATTTTGGTAATGTGCTTTCTATCCCTTTTGGCGGGAAAGCGGTGGAGGAGTTGGTGGAGAAGCCGTTGAGTTGGGTGGCAGAAGAGGTTCACAAGTTTCTGGAAACGGCATTGACGGAAGAACACTTCCTAGGGCTGATTGACTGGGTGGAAGAGCACCGTCCTTCACCAGCGTTGGCGAGAATTTATTGTGGGAACACAATTGATGTGGGACCCGCTGTTGTGGTGTCTTGTGGTCAAAGATTTCCAGAGTCAAAAGTTGACTTTGGTTGGGGAAAACCCGTGTTTGGATCATACCATTTTCATTGGGGTGGTGATGCTGGATATGTGATGCCAATGCCAAGTCCTAAGAAAAATGGTGATTGGGTGGTGTACATGCACCTTCTCAAACCCCACATACATTTCATTGAGTCTATGGCAAATCATGTCTTTAAGCCCTTCACTTGGGACTACCTCAACAATTAA 1377 0.4793 MGGNNGREELALRVSVTKEEVVAAVLPIQDHRLPFSNLDLLLPPVDVGVFFCYNTTPLSFGSMVESLKNALAQVLVSYYVFAGEVVQNSMGEPEILCNNRGVDFVEAEADVHLHHLNLYNPDESIEGKLVPKKKHGVLAVQVTSLKCGGIIVACTFDHRIADAHSANMFLVSWAEIARPMKPTTAAQPCFRHSLLIPRRPLCIHPSLDAMYVSLPPPSQLEPNHFNSLISRIYYTTADQLSHMQSLASSSDPIKNRTKLESFTAFLWKMVAMATSSSSSEKRLVAKMGVVVDGRKRLKEATMDDYFGNVLSIPFGGKAVEELVEKPLSWVAEEVHKFLETALTEEHFLGLIDWVEEHRPSPALARIYCGNTIDVGPAVVVSCGQRFPESKVDFGWGKPVFGSYHFHWGGDAGYVMPMPSPKKNGDWVVYMHLLKPHIHFIESMANHVFKPFTWDYLNN* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0541 458 Gene3D - 12 208 IPR023213 -
Ahy17g0541 458 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 11 452 - -
Ahy17g0541 458 Pfam Transferase family 13 445 - -
Ahy17g0541 458 Gene3D - 215 443 IPR023213 -
Ahy17g0541 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0541 Ahy-Chr17 5243093 5246870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0541 36 441 Monolignol Biosynthesis Gene Families AT5G48930 26.540 3.71e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0541 - - gmx:100809201 619.387