Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0539 ATGCTGGTGTTTGGTTTGGTGAAGCGAGGGTTAGGGTTCTTGTTAAGGTTCATGCTGCGTTTCTTCTTCCGATCCTTCAACAGAGCAATGGGTTGCTTCTTCGCGTGTTTCAGGAACAACGATAACCATCGTCGCCGCACTCACCTTACCGCCAACTCTTCTAGTTCCACCGATGTTCTGGTTTCTCGAAACAGCTATTCCTCTGTGTTTCAAGCTCAAGAGAGAGAAGATTGTGCAATCAATTGCGGTGATGTTGTGGGATTTCAGGGAGATGACCTGGGGCTTAAGGATGAGGCCAAGTTTCTTAAAGCCTGCGGTACTTTACCAGGGACACCTGTTGAAATTCGGAAAACATCTGAGAAACTGAAAGTGTCACCCTCTCCCGATAAACATTCTGAGCCATCAAGGTTTCATTCTTGGCTTCCGAATGAGTCTGTTGAGAAACTTCAACTGGATTTTCGTTCAGTTAACCCCCCAACACCCTTAAAAATTTGCCAAGAATTGGGAGATAGTTCAGACTCTTTTGAGCACACACCAGACAGATGTTTATCTGAGCCTTCAAGGTTTGATTCTTGGCTTCCCAACGAGTCTGTTGAGAAACTTCAACTGGATTTTCATTCTATTAAGCCCCTAACACCCATAAAAATTTGCCAAGAATTGGGAGACAGCAGAGACTCTTTTGAGCACACACCAAACAGATGTTTATCTGATGCACGAGATAGTCACCATGAATCTCTTGAACATATGGAAGGAAATAAGACATGGAGCCTTCATACTGCAGATAGGGCTGAAAATAATCCAGCTCCAGATTCACCCACAGACACACAGAGGAAGTGCAAATCAGTCCGGTTTAAGTGTGATACGGGCTTATCATCCTGTGGAAGTTCATCTGATGATAGTCGTTTGAAGAAAAGCTGGTCACCAAATAACCAAAATGCGAATAAGCGATCACCTTATCCTACCCCATTGAAGTTATTTGATGAGATGCAAACCCCAGGAACGGTTTGTCCTGCAACACTGGAAGAGTTACCTAATGGCAGGGCTCGTGTTCGGTCCCAGTTTGTCTACCCCACTCACAAACCAGATGAGAATGTCTTCCAGCGTAAAATACTTGAGGAGAAAGATTTAAACTCTGAACAAGATTCAAGTGAGTTGAGAGATTCTGCCGAGCAAGCTCAAATTGCTACTCCTACCACGCAAAAAGGTTCAAACCAAGTTTTGAAGGAAAATGAATCTAAAGCAGAAGTAAGCTTGTCTAATTGGTTAAGGCCTGCCCCAATTGATCAGGAGAAGGGAAACAAGAGAGTGGAGTCTGCTTCTAGCCAGATCCCGCATTTTCGGAAAACTTCTGCTGACAGGCCTATCCTTGGTGTGGCTGCAGCTCACTTTGAAAACGAGGATTCGAATATTTGTCCTCCGAAGTGGTGGGATGGAAATGGCATACCAAATTCAACCACTAAATACAAAGAGAAAGTGAAGTGGCATGCAACACCATTTGAAAAGAGATTGGAGAAGGCATTGACGGAGGAGACTTTTATCCCTCAAAGGAAGTTTGTTCCTGGAAAGCCAATGGATTTTGATGATATTGAAGAGAGTGATACCGCATTATCCCAGCTGCGATCTTCGACTAATCCAGAGTCAGTGGAGTCATTTTGA 1656 0.4402 MLVFGLVKRGLGFLLRFMLRFFFRSFNRAMGCFFACFRNNDNHRRRTHLTANSSSSTDVLVSRNSYSSVFQAQEREDCAINCGDVVGFQGDDLGLKDEAKFLKACGTLPGTPVEIRKTSEKLKVSPSPDKHSEPSRFHSWLPNESVEKLQLDFRSVNPPTPLKICQELGDSSDSFEHTPDRCLSEPSRFDSWLPNESVEKLQLDFHSIKPLTPIKICQELGDSRDSFEHTPNRCLSDARDSHHESLEHMEGNKTWSLHTADRAENNPAPDSPTDTQRKCKSVRFKCDTGLSSCGSSSDDSRLKKSWSPNNQNANKRSPYPTPLKLFDEMQTPGTVCPATLEELPNGRARVRSQFVYPTHKPDENVFQRKILEEKDLNSEQDSSELRDSAEQAQIATPTTQKGSNQVLKENESKAEVSLSNWLRPAPIDQEKGNKRVESASSQIPHFRKTSADRPILGVAAAHFENEDSNICPPKWWDGNGIPNSTTKYKEKVKWHATPFEKRLEKALTEETFIPQRKFVPGKPMDFDDIEESDTALSQLRSSTNPESVESF* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0539 551 MobiDBLite consensus disorder prediction 518 551 - -
Ahy17g0539 551 PANTHER - 21 181 - -
Ahy17g0539 551 PANTHER - 184 538 - -
Ahy17g0539 551 MobiDBLite consensus disorder prediction 387 417 - -
Ahy17g0539 551 MobiDBLite consensus disorder prediction 289 324 - -
Ahy17g0539 551 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 21 181 IPR039300 GO:0007142
Ahy17g0539 551 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 184 538 IPR039300 GO:0007142
Ahy17g0539 551 MobiDBLite consensus disorder prediction 376 448 - -
Ahy17g0539 551 MobiDBLite consensus disorder prediction 535 551 - -
Ahy17g0539 551 MobiDBLite consensus disorder prediction 231 250 - -
Ahy17g0539 551 MobiDBLite consensus disorder prediction 289 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0539 Ahy-Chr17 5222517 5226190 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0539 - - ahf:112702064 1067.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0539 17 5222517 5226190 Ahy17g0539 17 5222517 5226190 ECH
Ahy17g0539 17 5222517 5226190 Ahy7g0378 7 3228003 3231831 hybridization
Ahy17g0539 17 5222517 5226190 Ahy17g0557 17 5377786 5385380 PCT
Ahy17g0539 17 5222517 5226190 Ahy7g0394 7 3378382 3385865 PCT