Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0534 ATGGTTGATTTGATCGGAGAGTCATCGCATAACCAAATAGAGAATGTTTCAGCTGAGGAAATAGACGAATTGTTAGTTGATAGTGATGGCAATGATGTTGCAGACCTGTTACTGAATAGTATAGGAAGTATCGGTCGGGTTAATTTCGTAGGTTTGAGCGTTGATGCTGCTAAGAAGTATGTATTTTCGGACCTTGATGTTGCGTATGCCTTTTACAATGCATTTGGGAGGGTCAATGGATTTTCAATTAGGAAGTTCAAGGTTGGGCGAAGTGAGATTGATAAGCGCATACTCTGGCAAACATTTGTGTGTTCGAGACAAGGATATCGTATTTTCAGAGGGGTTGATGAAACAAATAGGAAGAGAGCTCCAAAGCCAGAGACTAGGTGTGGGTGTGTAGCACAAATGCGAGTTCACATAGATGTTGGCAGAGACTGGTGGTATACAACATTATTTCAAAATGAACATAATCATGAGTTAGTACCCCCAACTTTGAGCCGGATGTTGAGATCGCAACGGAGAATGACTGATCAAGAAATTCAAAGAATGAACGACATGAGAGATGCTGGAATTCCCACAACCCAAATCTATATGCATTTTGCCGAGCAATCTGGTGGTTTTGAGAATGTTAGATTTCAAAGAAAAGACATGTACAACCAAATAGAAAAGCAAAGGCAATTGATGGAAAGTGATGTGACCGAAACGTTGAAGTACCTAAAGAAGCGGAAGAAATTAGATCCAAAGTTTTACTGGAGTTACGAGGTGGATAACAATGGTGTGTTTCGGCACCTAATCTGGATGGACGGGAAGAGCCGTGTTGACTTTGAAGTATTTGGTGATGTTATGGCCTTTGATGCAACTTACAAGAAAAATAAGTACAAGTTTCCATTGGTAGTTTTCTCAGGAGTGAACCATCACCTTCAAACAATAGTTTTTGGCAGTGCAATTGTGGCTGATGAAGGAGAAGGAACTTACATATAA 981 0.4027 MVDLIGESSHNQIENVSAEEIDELLVDSDGNDVADLLLNSIGSIGRVNFVGLSVDAAKKYVFSDLDVAYAFYNAFGRVNGFSIRKFKVGRSEIDKRILWQTFVCSRQGYRIFRGVDETNRKRAPKPETRCGCVAQMRVHIDVGRDWWYTTLFQNEHNHELVPPTLSRMLRSQRRMTDQEIQRMNDMRDAGIPTTQIYMHFAEQSGGFENVRFQRKDMYNQIEKQRQLMESDVTETLKYLKKRKKLDPKFYWSYEVDNNGVFRHLIWMDGKSRVDFEVFGDVMAFDATYKKNKYKFPLVVFSGVNHHLQTIVFGSAIVADEGEGTYI* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0534 326 PANTHER OS02G0262500 PROTEIN 61 325 - -
Ahy17g0534 326 Pfam FAR1 DNA-binding domain 71 162 IPR004330 -
Ahy17g0534 326 Pfam MULE transposase domain 281 325 IPR018289 -
Ahy17g0534 326 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 325 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0534 Ahy-Chr17 5172713 5173800 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g0534 FAR1 5.40E-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0534 - - aip:107623722 646.736