Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0513 AATGTTTTGAAACATTTTAGGAATAATAACAATAAGCCAAAGAAGAAAGAGAAAAAGCCAAGAGAGCCACGCTTTGCATTCATGACCAAAAGTGAGATTGATCACCTTGAAGATGGATATAGATGGAGAAAATATGGACAGAAAGCAGTCAAAAATAGTCCATATCCAAGGAGTTATTATAGATGCACTACTCAGAAGTGCAATGTGAAGAAGAGAGTGGAGAGGTCATACCAAGATCCATCAATTGTGATCACAACATATGAAGGGCAGCACAACCACCACTGCCCGGCGACGCTCCGCGGCAGCGCCGCCAGCGTGTTTGCTTCTTCACCTTCCCTTTTTGCTTCCACATCCCTAATAAGGCCAACAAGTTTCCCCCAAGATTTCCTCTCTCAATTGCTTCCAACTTACACTACTAACAATAGTAGCACCCATCAACCACTAATAAATAATAATAATCACCATCAAAACCCTATTTTCCAATTAAACCTTGGCCATAATCCTCATTATCCTCCTCCTCCACCGCCACCACAAGAGCATCATCATCATCTTCAATTCCCTCATGACTATGGCTTGTTGCAAGACCTACTACCTTCATTCCCAGGCAAACAAGAACCTTAA 621 0.4203 NVLKHFRNNNNKPKKKEKKPREPRFAFMTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSYQDPSIVITTYEGQHNHHCPATLRGSAASVFASSPSLFASTSLIRPTSFPQDFLSQLLPTYTTNNSSTHQPLINNNNHHQNPIFQLNLGHNPHYPPPPPPPQEHHHHLQFPHDYGLLQDLLPSFPGKQEP* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0513 206 MobiDBLite consensus disorder prediction 143 184 - -
Ahy17g0513 206 Pfam WRKY DNA -binding domain 37 93 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g0513 206 MobiDBLite consensus disorder prediction 1 19 - -
Ahy17g0513 206 MobiDBLite consensus disorder prediction 143 163 - -
Ahy17g0513 206 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 199 IPR044810 GO:0003700
Ahy17g0513 206 ProSiteProfiles WRKY domain profile. 31 96 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g0513 206 SMART WRKY_cls 36 95 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g0513 206 MobiDBLite consensus disorder prediction 1 22 - -
Ahy17g0513 206 SUPERFAMILY WRKY DNA-binding domain 28 96 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g0513 206 Gene3D WRKY domain 21 97 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g0513 206 PANTHER WRKY TRANSCRIPTION FACTOR 28-RELATED 10 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0513 Ahy-Chr17 4942350 4944198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0513 11 206 WRKY Transcription Factor Family AT4G18170 52.020 2.86e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy17g0513 WRKY 1.10E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0513 - - ahf:112762407 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0513 17 4942350 4944198 Ahy17g0513 17 4942350 4944198 ECH
Ahy17g0513 17 4942350 4944198 Ahy7g0360 7 3014673 3017694 hybridization