Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0494 ATGCAGCAAGATCAAAGAAAAAAGAGTTCAATGGAGATGGAGTTTTTCTCTGATTATGGGGATGCCAGCCGGTACAAAATTCAAGAAGTCATCGGGAAAGGAAGTTATGGTGTTGTATGTTCAGCTATTGACACTCATACCGGTGAAAAAGTTGCAATAAAAAAGATTCATGATATATTTGAGCATATATCCGATGCTGCACGCATTCTCCGGGAGATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATCAAACATGTCATGATGCCTCCTTCTAGGAGGGAATTTAAGGACATTTATGTTGTTTTCGAGCTCATGGAGTCGGATCTACATCAAGTCATTAAAGCCAATGATGACTTGACAAAGGAGCACTATCAATTTTTCCTTTACCAGTTACTTCGAGCATTGAAGTATATTCACACCGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATACTGGCCAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCAAGAGTCGCTTTCACCGACACACCAACAACAGTATTTTGGACGGATTACGTTGCGACAAGGTGGTATAGAGCACCGGAGCTTTGTGGATCGTTTTACTCAAAGTATACTCCAGCAATCGACATATGGAGTATAGGTTGCATCTTCGCAGAAGTATTATTAGGAAAGCCACTTTTCCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACCGATCTGCTTGGAACTCCTTCGCTGGATACTATATCCCGAGTACGCAATGATAAGGCTAGGAGATACCTAACTAGTATGCGGAAGAAGCAGCCTGTGCCATTTGCACAGAAGTTTCCTAATGCAGATCCTTTAGCATTACGACTACTTGAAAGATTACTTGCCTTTGACCCGAAAGACAGGCCTACTGCTCAAGAGGCATTAGCTGATCCTTACTTCAAGGGATTAGCAAAGGTGGAGAGGGAACCATCCTGTCATCCTATCACGAAAATGGAGTTTGAATTTGAAAGGCGAAGAGTCACAAAGGAAGAAATCCGAGAGCTAATTTTTCGTGAGATTTTAGAGTACCATCCCCAACTTTTGAAAGACTACATAAATGGAACGGAGAGGGCTAATTTCCTTTATCCAAGTGCTGTTGATCAATTCAAAAAGCAGTTTGCTCATCTTGAGGAAAATGGTGGCAAAAGTAGTCCAGTTATGCCACTTGAACGAAAACATGTATCGCTTCCAAGGTCAACGGTTGTTCATTCGAATATGGTAGCCCAAAAAGAGCAATCAAACAATGCTTCGAGCAAAAACCGGCAACCGGCCGAGGAATATAATAACAATCAAAGAATTCCACCAGCAAAACCCGGGAAAGTAGTTGGTCCCGTTGTCCCGTATGAGTATGGTAGTATCGTCAAGGACTCTTTCGATCCGAGGACATTCATCAGAGGTTCTTTTGTTCCTTCTCAAACCGTTCCTGCCACGTACTATTACCAAAGATCAACCACCGGACACCAAGACGCCGAAAAGGGGGTGCCTTTGAAACCAAAACATGGCCCTCAGCAATGTGGAGTGAATGCGAAAATAGCACCAGACATAGCCATCAACATTGATACTAACCCTTTTTTCATGACAAGGGCAATAGGAGTGAACAAGATAGAACAAGATGATAATAATAATAACCATAGAATAGCCATTGACACAAACTTGCTTCAATCAAAAGCTCATCAATATGGCGGCATTGGTGCTGCGGCCACGGCCACAACCGGTGCCACTGCTCATAGAAAGGTTGGACCTGTTCAGTATGGCATGACAAGGATGTTCTAA 1821 0.4223 MQQDQRKKSSMEMEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHVMMPPSRREFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFTDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLLGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAQEALADPYFKGLAKVEREPSCHPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYINGTERANFLYPSAVDQFKKQFAHLEENGGKSSPVMPLERKHVSLPRSTVVHSNMVAQKEQSNNASSKNRQPAEEYNNNQRIPPAKPGKVVGPVVPYEYGSIVKDSFDPRTFIRGSFVPSQTVPATYYYQRSTTGHQDAEKGVPLKPKHGPQQCGVNAKIAPDIAINIDTNPFFMTRAIGVNKIEQDDNNNNHRIAIDTNLLQSKAHQYGGIGAAATATTGATAHRKVGPVQYGMTRMF* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0494 606 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0494 606 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 476 - -
Ahy17g0494 606 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Ahy17g0494 606 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0494 606 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Ahy17g0494 606 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Ahy17g0494 606 MobiDBLite consensus disorder prediction 422 445 - -
Ahy17g0494 606 MobiDBLite consensus disorder prediction 422 456 - -
Ahy17g0494 606 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Ahy17g0494 606 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Ahy17g0494 606 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0494 606 CDD STKc_TDY_MAPK 24 361 - -
Ahy17g0494 606 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0494 Ahy-Chr17 4782973 4788440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0494 1 436 MAP Kinase Gene Family AT2G42880 88.383 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Ahy17g0494 Pkinase 1.30E-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0494 - - gmx:100815293 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0494 17 4782973 4788440 Ahy17g0494 17 4782973 4788440 ECH
Ahy17g0494 17 4782973 4788440 Ahy7g0350 7 2874346 2879927 hybridization
Ahy17g0494 17 4782973 4788440 Ahy17g0494 17 4782973 4788440 PCT
Ahy17g0494 17 4782973 4788440 Ahy7g0350 7 2874346 2879927 PCT
Ahy7g0350 7 2874346 2879927 Ahy17g0494 17 4782973 4788440 PCT