Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0468 ATGGGGAAAAACGAATTTCTTACACCGAAAGCGATCGCCAATCGAATCAAGGCAAAAGGGCTGCAGAAGCTTAGGTGGTACTGCCAGATGTGCCAGAAGCAATGCCGAGACGAGAATGGCTTCAAATGCCACTGCATGAGTGAAAGCCACCAGCGCCAGATGCAGATTTTTGGCCAAAACCCACATCGGATAGTCGAGGGTTATTCCGAGGAGTTTGAGACATCTTTCCTTGAGCACATGAAGCGCAGCCATCGGTTCAGCCGCATTGCTGCCACCGTGGTTTATAATGAGTACATCAATGACAGGCATCATGTTCATATGAACTCCACTCAGTGGGCAACTCTTACAGAGTTTGTCAAGTACTTGGGTCGAACGGGGAAGTGTAAGGTCGAGGAAACACCTAAGGGTTGGTTCATTACGTATATAGATAGAGATTCTGAGACCCTTTTCAAGGAGAGGTTGAAGAATAAGAGGATCAAGGCAGATATGGTGGAGGAAGAGAAGCAAGAGAAGGAGATTATGAAACAGATCGAAAAAGCTGAGCAATTGATGCAACGGTCAGATACCACTGAGGCTGATCAGGCTTCAAGGGTCGAGGCTCCGAGGGAACTAAATGTGGAAGATGGAGTTAAGATAGGATTTTCTCTTGGGGCATCGGCTAAGCCTGTGATCAAAGAGAAACACGAGTCATCGAAGAAGGCTGTGTTTGATGAGGATGAGGAAGATAAATACAAGGAAAGGAATCCAGGAAATAGTTTGAAGAGAAAAGAGAGTGGTGGTGGAGGAAAGTCAACCTTGGAAGAATTGATTAGGGAAGAGGAGAAGAAAAAGGAGAAAATCAACAGGAAGGACTATTGGTTGCATGAGGGAATCATTGTTAAGGTTATGAGCAAGGCCTTGGCAGAGAAGGGGTACTACAAGCAAAAGGGTGTGGTGAGAAAGGTGATTGACAAATATGTTGGGGAAATTGAAATGCTTGAAAGCAAGCATGTGCTGAGAGTCGATCAGGAAGAGCTTGAAACTGTGATTCCACAAGTTGGGGGCCGTGTAAAAATTGTCAATGGTGCATATCGTGGATCAACTGCGAAACTTTTGGGAGTGGATACGGATCATTTTTGCGCAAAGGTGCAGATAGAGAAAGGTGCCTATGATGGCAGGGTACTCAAAGCTGTGGAATACGAAGACATTTGTAAAATAGCACAATGA 1206 0.4519 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNPHRIVEGYSEEFETSFLEHMKRSHRFSRIAATVVYNEYINDRHHVHMNSTQWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERLKNKRIKADMVEEEKQEKEIMKQIEKAEQLMQRSDTTEADQASRVEAPRELNVEDGVKIGFSLGASAKPVIKEKHESSKKAVFDEDEEDKYKERNPGNSLKRKESGGGGKSTLEELIREEEKKKEKINRKDYWLHEGIIVKVMSKALAEKGYYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQEELETVIPQVGGRVKIVNGAYRGSTAKLLGVDTDHFCAKVQIEKGAYDGRVLKAVEYEDICKIAQ* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0468 401 SMART Kin17_mid_2 52 178 IPR019447 -
Ahy17g0468 401 CDD KOW_KIN17 346 399 IPR041995 -
Ahy17g0468 401 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Ahy17g0468 401 SUPERFAMILY beta-beta-alpha zinc fingers 26 66 IPR036236 -
Ahy17g0468 401 MobiDBLite consensus disorder prediction 223 267 - -
Ahy17g0468 401 PANTHER BNAA05G13760D PROTEIN 1 400 - -
Ahy17g0468 401 Coils Coil 154 186 - -
Ahy17g0468 401 Coils Coil 263 283 - -
Ahy17g0468 401 SMART kow_9 343 370 IPR005824 -
Ahy17g0468 401 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 400 IPR037321 -
Ahy17g0468 401 MobiDBLite consensus disorder prediction 182 202 - -
Ahy17g0468 401 Gene3D - 344 400 IPR014722 -
Ahy17g0468 401 Pfam KN17 SH3-like C-terminal domain 282 335 IPR041330 -
Ahy17g0468 401 MobiDBLite consensus disorder prediction 223 253 - -
Ahy17g0468 401 Gene3D - 290 343 - -
Ahy17g0468 401 Gene3D - 60 160 IPR038254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0468 Ahy-Chr17 4516574 4519579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0468 1 400 C2H2 Transcription Factor Family AT1G55460 71.703 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0468 K13102 - gmx:100785931 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0468 17 4516574 4519579 Ahy7g0324 7 2624823 2626746 hybridization