Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0439 ATGAGCTTCTTTGCATGTTGCACATCACAACATAGGTTCCATAAGAAAACTTTGAAGAAGAAAATTAAGAGCTATCATGAAGGGAAACCTGTACCATCAATATTTGCCAATTTCTCTCTCAAAACTGATAGTAGCAAGCGAAATTTCATCGAAGGCGAAATAGAAAAACTTGGAAGAGGAAATTTAACCTCTCAGATTTTTACTTATTCCGAGCTATGCTTCGCAACCCGGAACTTTCACCCTGACTACATGATTGGTGAAGGAGGCTTTGGAAGAGTATACAAAGGATTCCTTAAAGGAACTAATCAGGTTGTTGCTGTGAAGCAACTTAATAGGAATGGATTTCAAGGAAACAGAGAATTTATAGTAGAGGTTTTGATGTTAAGCCTCTTGCATAATCCTTACCTTGTTAATTTAGTAGGGTATTGTGCTGATGGTGATCAAAGAGTTCTTGTGTATGAGTACATGGTTAATGGTTCTTTAGAAGATCATCTTTTTGATCTACCTCCAGACAAAAAGGCTTTGGATTGGAGCACAAGAATGAAAATTGCAGAAGGTGCTGCTAGAGGACTTGAATATTTACACGAAGTAGCAAATCCGCCGGTTATATATCGCGATTTCAAGGCATCAAACATACTTTTGGATGAGGATTTCAATCCAAAGTTATCAGATTTTGGACTAGCAAAACTTGGTCCGACCGGCGATAAAACTCATGTGTCAACAAGGGTGATGGGAACTTATGGTTATTGTGCTCCTGAGTATGCCTCCACAGGACAATTGACAACAAAATCTGATGTATATAGTTTTGGTGTTGTGCTTTTGGAGATGATCACAGGTAGAAGAGTCATTGATCATATGAGACCATCAGGGGAGCAAAACTTAGTTACTTGGGCATACCCACTACTCAAAGACAGAAGAAAGTTTACACTAATGGCTGATCCATTGCTAGAAGGGAGATACCCTATAAGGGGTCTGCACCAAGCAATAGCAATAGCAGCAATGTGTCTTCAGGAAGATGCTGAATTAAGGCCTTTGATTAGTGATGTAGTTACAGCTCTTAATGTATTAGCAAGGAAGAATGTAGAATGGAGTGATAACAATAATAATAGTAATAATTCAGTTGAGAGAATGATTTTAATAGATTAG 1146 0.3805 MSFFACCTSQHRFHKKTLKKKIKSYHEGKPVPSIFANFSLKTDSSKRNFIEGEIEKLGRGNLTSQIFTYSELCFATRNFHPDYMIGEGGFGRVYKGFLKGTNQVVAVKQLNRNGFQGNREFIVEVLMLSLLHNPYLVNLVGYCADGDQRVLVYEYMVNGSLEDHLFDLPPDKKALDWSTRMKIAEGAARGLEYLHEVANPPVIYRDFKASNILLDEDFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDVYSFGVVLLEMITGRRVIDHMRPSGEQNLVTWAYPLLKDRRKFTLMADPLLEGRYPIRGLHQAIAIAAMCLQEDAELRPLISDVVTALNVLARKNVEWSDNNNNSNNSVERMILID* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0439 381 Pfam Protein kinase domain 83 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0439 381 PANTHER OS07G0668900 PROTEIN 1 376 - -
Ahy17g0439 381 Gene3D Phosphorylase Kinase; domain 1 64 155 - -
Ahy17g0439 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Ahy17g0439 381 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Ahy17g0439 381 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 376 - -
Ahy17g0439 381 SUPERFAMILY Protein kinase-like (PK-like) 62 353 IPR011009 -
Ahy17g0439 381 Gene3D Transferase(Phosphotransferase) domain 1 156 378 - -
Ahy17g0439 381 CDD STKc_IRAK 85 354 - -
Ahy17g0439 381 ProSiteProfiles Protein kinase domain profile. 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0439 Ahy-Chr17 4264177 4267043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0439 61 357 Glycoside Hydrolase AT3G07070 71.717 5.16e-159 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Ahy17g0439 Pkinase 7.80E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0439 - - gmx:100798032 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0439 17 4264177 4267043 Ahy11g0152 11 1572787 1575553 ECH
Ahy17g0439 17 4264177 4267043 Ahy17g0439 17 4264177 4267043 ECH
Ahy17g0439 17 4264177 4267043 Ahy7g0304 7 2459044 2461495 hybridization
Ahy17g0439 17 4264177 4267043 Ahy17g0439 17 4264177 4267043 PCT
Ahy17g0439 17 4264177 4267043 Ahy7g0304 7 2459044 2461495 PCT
Ahy7g0304 7 2459044 2461495 Ahy17g0439 17 4264177 4267043 PCT